NONHSAT117751
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT117751 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
608 nt |
Genomic location |
chr6_mcf_hap5-:3118744..3120481 |
Exon number |
2 |
Exons |
3118744..3119297,3120428..3120481 |
Genome context |
|
Sequence |
000001 GAGGCAGCCC CATGGAGCCT GTCCACTATG TCCTGGTGCC TTTTCATGAC CCAGagacgg agtttcaccg tgttaaccag 000080
000081 gatggtctcc atctcctgac ctcgtgatcc gcccgcctcg gcctcccaaa gtgctgggat tacaggtgtg agccaccgtg 000160 000161 cccggccGCC ATTTTCAATT CTCTCCATTT CCTATAGACA GAGATTGGTA TCAAGATGGG GTTGTTGGGG CCAGGCTTCT 000240 000241 GGGAAGCATC TGAGATAACT AGCTACATTG TATTCCTTTT CCATTgatta gaagttagac tctctggctt gagtctgact 000320 000321 gtgtgtcttt aggctggtca tgtaaacttt ctttgcctcg atttcatcat ctgtaaaatg ggtatCAGTT atcacatcag 000400 000401 ggtggggcag gatgttggaa tgtcatcagt taaggctatt ttcacttctt ttgtggatct tcagttgctt caggccatct 000480 000481 ggatgtataa gtgccagtca caggggatat gattggttag cttgggctca gaggcctgac aCCTCCCTCA Tcctgcctaa 000560 000561 ctcccagagt tgaaatgatg atcaaataaa atGCCTACTG GACTGAGA |
Predicted Small Protein
Name | NONHSAT117751_smProtein_377:511 |
Length | 45 |
Molecular weight | 4950.7767 |
Aromaticity | 0.113636363636 |
Instability index | 67.7477272727 |
Isoelectric point | 7.93878173828 |
Runs | 5 |
Runs residual | 0.0494652406417 |
Runs probability | 0.0239357004063 |
Amino acid sequence | MGISYHIRVGQDVGMSSVKAIFTSFVDLQLLQAIWMYKCQSQGI |
Secondary structure | LLEEEEEELLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |