NONHSAT117816
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT117816 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
833 nt |
Genomic location |
chr6_mcf_hap5-:4010947..4011779 |
Exon number |
1 |
Exons |
4010947..4011779 |
Genome context |
|
Sequence |
000001 GCAGTGCTAA TATTATCAAT TATTAGTGTC TCTGCAACTT CAGTATCTCT TATTATTCTA ATTCTACTAA CTATTCTCGA 000080
000081 GTTCGCTGTC GCTCTTATTC AAGCTTATGT CTTCACACTA TTAGTAAGTC TTTATTTGCA TGATAATACA TAATGACCCG 000160 000161 CCAAACTCAT GCCTACCATA TAGCTGTACC TAGCCCTTGA CCACTAACAG GAGCTCTCTC GGCTCTCCTA ATAACATCTG 000240 000241 GCCTGGCCAT ATGATTTCAC TTTAATTCTA CCACTCTTTT AACTTTAGGC CTACTAACCA ACACACTGAC TATACATCAG 000320 000321 TGATGACGTG ATGTTGTCCG AGAAAGTGTA TTACAAGGCC ACCACACAAC AATTGTCCTA AAAGACCTCT GATACGGGAT 000400 000401 GCTTCTATTT ATTATCTCAA AAGTATTCTT CTTCGCTGGT TTTTTTCTGG GCATTTTATC ACTCCAGTTT AGCACCGACC 000480 000481 CCAGAATTAG GAGGACATTG ACCCCCAACA GGTATTCTTC CCCTGAACCC TTTAGAAGTA TCTCTCCTAA ATACGTCTGT 000560 000561 ATTACTTGCA TCAGGAGTTT CAATTACTTG AGCCCACCAC AGCCTAATAG AAGGTAACCA AAAACAAATA ATTCAAGCAG 000640 000641 TACTTATCAC GATCCTCTTA GGAGTCTATT TCACTCTTCT ACAAGTCTCA GAATATTTCG AGGCCCCCTT TATTATCTCT 000720 000721 GATGGAATCT ATGGCTCAAC ATTCTTTGTA GCCACAGGCT TTCATGGACT TCATGTTATT ATTGGATCAA CAATTCTCAC 000800 000801 CATCTGCCTT CTTGCCAATT AAAATTTCAT TTT |
Predicted Small Protein
Name | NONHSAT117816_smProtein_398:616 |
Length | 73 |
Molecular weight | 8450.8605 |
Aromaticity | 0.166666666667 |
Instability index | 76.4527777778 |
Isoelectric point | 10.8981323242 |
Runs | 9 |
Runs residual | 0.0159164639092 |
Runs probability | 0.0622583367682 |
Amino acid sequence | MLLFIISKVFFFAGFFLGILSLQFSTDPRIRRTLTPNRYSSPEPFRSISPKYVCITCIRS FNYLSPPQPNRR |
Secondary structure | LEEEEEEHHHHHHHHHHHHEEEEELLLLLEEELLLLLLLLLLLLLLLLLLLEEEEEEEEE LLLLLLLLLLLL |
PRMN | LHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLL |
PiMo | i??????????????????????????????????????????????????????????? ???????????? |