NONHSAT118255

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT118255

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1194 nt

Genomic location

chr6_ssto_hap7-:1047268..1054496

Exon number

6

Exons

1047268..1047392,1049546..1049689,1049804..1050118,1050487..1050771,1051010..1051264,1054427..1054496

Genome context

Sequence
000001 ATGGAGATGA GCCTAGTCCT GCTGTTCCTG ATCCGCACTG CCCTTTTTGC ACCCCAGGGA GCTGCTGCTG AGCCCCACAG 000080
000081 TCTTTGTTAC AACCTCACGG TGCTGTCCCG GGATGGATCT GTGCAGTCAG GGTTTCTCGC TGAGGAACAT CTGGATGGTC 000160
000161 AGCTCTTCCT GCTCTGTGAC AGGCAGAAAG GCAGGGCAGG GCCCCGGGGA CAGTGGGCAG AAGCAGTCCT GGGAGCTGAG 000240
000241 ACCTGGGACA CAGAGACTGA AGACTTGACA GAGAATGGGC AGGAGCTCAG GAGGACCCTG GCTCATATCA AGGGCCAGAA 000320
000321 AGGAGCCTTG CATTCCCTCC AGGAGATTAC GGTTTGTGAG ATCAGGAAGC CAGCAGCACC AGGGGCTTTA GGCATTTCTA 000400
000401 CACATATGGG AAGCTCTTCC TCTCTCCCAA CCTGGAGACT CAGTAATGGA CAGTGCCCCG GTCCTCCAGA GCTCAGACTT 000480
000481 TGGCTATGAA TGTCACAAAT TTCTGGGAGG AAAATGCCAT GCAGACCAAG ACACACTATT GCCCTGTGCA GGCAGACTAC 000560
000561 ATGCAAAAGC TATGGTGATA TCTGAAATTC TGGAGGTATC AGAAAAACAG GCCACATGCC TCACTGGCTC TGCCCTTTTG 000640
000641 TCTCCAATGA CCCCCACAGT GAATGAGATG CACAGTGGGG CCTTAGAAGG CAATGTCACC ATGATGTGCT GGTCTCCATC 000720
000721 TTCTATCCCT GGAATATCTC TCTGACCTGG CATCAGGATG AGGCATCTTT GAGCCAGGAT GCCCAGCAGT CTACGGGTGT 000800
000801 CCTGCCCAAT GGGAATGGGA CCTACCAGAC CTGCATGGCC ACCAGGATTC CCCGAGGAGA GGAGCAGAGG TTCACCTGCT 000880
000881 ACATGGGACA CAGAGGGAAT CACAGCACTC ACCCTGTGCC CTCTGAGAAG GCCCTGGTGC TTCAGAGTCA ATGGCAGCCA 000960
000961 TTCTGTATGC TGCTATTGCT ACTGTCATTA TTATTAGTAT TAGTAGTAGT AGTAGTATTC TCTGTGTCCT TTGGTGCAAG 001040
001041 AAGAAGACAA CATCAGCTGC AGAGTCCAGA GCACGTGAGC CTGCAAGGCC CGGATCAACG CCCGGTTGGG ACAGGAGACC 001120
001121 ACCAGGGCAG TGCACAGCTG GGATTTCAGT CTCTGGTGTC AACTCCTGGG TCTACTGGCT CCACTGAGGG CAGC
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Predicted Small Protein

Name NONHSAT118255_smProtein_950:1186
Length 79
Molecular weight 8333.5627
Aromaticity 0.0769230769231
Instability index 56.9397435897
Isoelectric point 9.64581298828
Runs 12
Runs residual 0.0201688555347
Runs probability 0.0645719248661
Amino acid sequence MAAILYAAIATVIIISISSSSSILCVLWCKKKTTSAAESRAREPARPGSTPGWDRRPPGQ
CTAGISVSGVNSWVYWLH
Secondary structure LHHHHHHHHHHEEEEEELLLLLEEEEEEELLLLLHHHHHHLLLLLLLLLLLLLLLLLLLL
EEEEEEEELLLLEEEEEL
PRMN LLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLL
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