NONHSAT118255
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT118255 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1194 nt |
Genomic location |
chr6_ssto_hap7-:1047268..1054496 |
Exon number |
6 |
Exons |
1047268..1047392,1049546..1049689,1049804..1050118,1050487..1050771,1051010..1051264,1054427..1054496 |
Genome context |
|
Sequence |
000001 ATGGAGATGA GCCTAGTCCT GCTGTTCCTG ATCCGCACTG CCCTTTTTGC ACCCCAGGGA GCTGCTGCTG AGCCCCACAG 000080
000081 TCTTTGTTAC AACCTCACGG TGCTGTCCCG GGATGGATCT GTGCAGTCAG GGTTTCTCGC TGAGGAACAT CTGGATGGTC 000160 000161 AGCTCTTCCT GCTCTGTGAC AGGCAGAAAG GCAGGGCAGG GCCCCGGGGA CAGTGGGCAG AAGCAGTCCT GGGAGCTGAG 000240 000241 ACCTGGGACA CAGAGACTGA AGACTTGACA GAGAATGGGC AGGAGCTCAG GAGGACCCTG GCTCATATCA AGGGCCAGAA 000320 000321 AGGAGCCTTG CATTCCCTCC AGGAGATTAC GGTTTGTGAG ATCAGGAAGC CAGCAGCACC AGGGGCTTTA GGCATTTCTA 000400 000401 CACATATGGG AAGCTCTTCC TCTCTCCCAA CCTGGAGACT CAGTAATGGA CAGTGCCCCG GTCCTCCAGA GCTCAGACTT 000480 000481 TGGCTATGAA TGTCACAAAT TTCTGGGAGG AAAATGCCAT GCAGACCAAG ACACACTATT GCCCTGTGCA GGCAGACTAC 000560 000561 ATGCAAAAGC TATGGTGATA TCTGAAATTC TGGAGGTATC AGAAAAACAG GCCACATGCC TCACTGGCTC TGCCCTTTTG 000640 000641 TCTCCAATGA CCCCCACAGT GAATGAGATG CACAGTGGGG CCTTAGAAGG CAATGTCACC ATGATGTGCT GGTCTCCATC 000720 000721 TTCTATCCCT GGAATATCTC TCTGACCTGG CATCAGGATG AGGCATCTTT GAGCCAGGAT GCCCAGCAGT CTACGGGTGT 000800 000801 CCTGCCCAAT GGGAATGGGA CCTACCAGAC CTGCATGGCC ACCAGGATTC CCCGAGGAGA GGAGCAGAGG TTCACCTGCT 000880 000881 ACATGGGACA CAGAGGGAAT CACAGCACTC ACCCTGTGCC CTCTGAGAAG GCCCTGGTGC TTCAGAGTCA ATGGCAGCCA 000960 000961 TTCTGTATGC TGCTATTGCT ACTGTCATTA TTATTAGTAT TAGTAGTAGT AGTAGTATTC TCTGTGTCCT TTGGTGCAAG 001040 001041 AAGAAGACAA CATCAGCTGC AGAGTCCAGA GCACGTGAGC CTGCAAGGCC CGGATCAACG CCCGGTTGGG ACAGGAGACC 001120 001121 ACCAGGGCAG TGCACAGCTG GGATTTCAGT CTCTGGTGTC AACTCCTGGG TCTACTGGCT CCACTGAGGG CAGC |
Predicted Small Protein
Name | NONHSAT118255_smProtein_950:1186 |
Length | 79 |
Molecular weight | 8333.5627 |
Aromaticity | 0.0769230769231 |
Instability index | 56.9397435897 |
Isoelectric point | 9.64581298828 |
Runs | 12 |
Runs residual | 0.0201688555347 |
Runs probability | 0.0645719248661 |
Amino acid sequence | MAAILYAAIATVIIISISSSSSILCVLWCKKKTTSAAESRAREPARPGSTPGWDRRPPGQ CTAGISVSGVNSWVYWLH |
Secondary structure | LHHHHHHHHHHEEEEEELLLLLEEEEEEELLLLLHHHHHHLLLLLLLLLLLLLLLLLLLL EEEEEEEELLLLEEEEEL |
PRMN | LLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLLL |
PiMo | i??????????????????????????????????????????????????????????? ?????????????????? |