NONHSAT118365
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT118365 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1007 nt |
Genomic location |
chr6_ssto_hap7+:2088741..2092309 |
Exon number |
2 |
Exons |
2088741..2088922,2091485..2092309 |
Genome context |
|
Sequence |
000001 agttggatgc tgaaacttgc agtcacacaa ggacttgaac ctagagcttt tctaaagccc gtactctttc cagtacCCTG 000080
000081 AGCCAGGGGA GCCAGCGGGC AGAAATGACG TGTGAGGTAC CCTCTTTCCC TTCACTTCCA TGTGATCTGT TACTCATTTT 000160 000161 GTCAAGACAT CCTGGGTCCC AGgtgccagg tgctacacaa gatactggct atagcagcga acaggacagc ccgtctcatc 000240 000241 ctcatggagg tcacaggaca atgagaagaa agactttttt atttttattt ttttgagacg gagttttgct cttgttgccg 000320 000321 aggctggagt gcagtggtgt gatctcgact cactgcaacc tccgcctccc aagttcaagc aattatcctg cctcaggcct 000400 000401 cttgagtagc tgggattaca ggcacctgcc accactcctg gctaattttt tgtattttta gtagagacag gggtttcatc 000480 000481 atgttggcca ggctggtctc gaactcctga cctcaggtga tccacccacc tcggcctccc aaagtgcagg gattacaggc 000560 000561 atgagccatc gaacccggcc caagaagaaa gacattgaac aagtaattac agggtattgg gtgttatgaa agaaaagcat 000640 000641 ggtactgtat aatgaggtca tctaatttag tctggggtga caaggaatgc ctactaaaga aggtatcgtt taagacatac 000720 000721 ctggggaata gcggtagtGA AAATAGAagc tccagaaatg cagggaccat ggctgacatg tttaccatgc cagtgtctgg 000800 000801 catggaagag gcccaattcc tttggttgaa aggatgaaGT AATCTAGCTG AATAAAGGGT GTGTGCGTGC ACGCAGGTGT 000880 000881 GTTTGTAGTT AACCTTCCTT TAGCTCAGCT TAGGAAACAG CTTTTGTAAA ACTGCGTAAC TAGTAGTAGG TGAGAGAGGA 000960 000961 ATACGAATGA TATACACACC ATTAAAGACA ACTTACTAAC AGCATGA |
Predicted Small Protein
Name | NONHSAT118365_smProtein_104:295 |
Length | 64 |
Molecular weight | 7016.8869 |
Aromaticity | 0.0952380952381 |
Instability index | 70.6206349206 |
Isoelectric point | 6.88751220703 |
Runs | 8 |
Runs residual | 0.0179786200194 |
Runs probability | 0.0442722133898 |
Amino acid sequence | MTCEVPSFPSLPCDLLLILSRHPGSQVPGATQDTGYSSEQDSPSHPHGGHRTMRRKTFLF LFF |
Secondary structure | LEEELLLLLLLLLHHHEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEE EEL |
PRMN | - |
PiMo | - |