NONHSAT118612
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT118612 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
928 nt |
Genomic location |
chr7+:171777..176468 |
Exon number |
2 |
Exons |
171777..171899,175664..176468 |
Genome context |
|
Sequence |
000001 GCCTGCACCC TTCTCTCACT GCTTTCCAGG GGGAGCTCTC TCAGGTCCAG AGCCCCACGG CTCACACCTC CTCTCCTGCC 000080
000081 TCTGGCTTCC TGTCTTCAGG AGGATATTTC AAGTTCCAAG AAGGTGCGAA AACTGCGTTT TCTTCTTGAG TTCCGTGTTT 000160 000161 CAGGGAGAGA ATCGTGAAGA AACAGACTAA AGGACTTTGT TGCAAGCTAC AGTCATGAAG AAGGACACGT GGGTGAGGCT 000240 000241 GGGAGCCCGG GGAGCCTGGT GTCAGCCCCA GTCCGAACAG CGGAGCCAGC AGGAAGACCC TGCCTCTGTG AGTGTGTGGG 000320 000321 GTGCTTTGGA GATGGGGGTG TGTTTAGATT TTGTCTCTTC CATGTTATTC CCATGGCAGG CTCTGCACCA GTCCCCGGCG 000400 000401 CTGCCTGCGG CATCTGATTC TGCCGGCGCT GCCCGCTTAG CTTATGGGTA TGCAGAAGAT CTGCATCATG GTTCCTGCTG 000480 000481 AAGAAGGGAg tgtgtggctg tgtgtgtgtg gctgtgtgtg tgtgcgtgtg CACAGGCATG CACACACCTG TGTTtacatg 000560 000561 aacacatatg aatacagtgt atgtgtacac acacaaacac gtgtgtgcat gtgaggtaca tgcatgtgca catttgctta 000640 000641 catgtacgtg tgtgtgtgca cgtgcataca catgtgcgat tggcaagtgt gtgcatgcat atgtatatgg gcacatatat 000720 000721 gtacaggcat gtatgcacgt ttgtgtgttt ggtgtgtcta tatatgtacg tgtatatggc cacacacgga tacaggtatg 000800 000801 tatacacctg tgcatgcacg cttgcCCAGA CACACAACTG CACACCTCCC TGCCCTGCAC CCTGCCTTTG GGCTCTCCAT 000880 000881 CGTTGCTGCT GGCTGATAGG TCTTGAAAGG CCCAGGCTGG TGAGTAAG |
Predicted Small Protein
Name | NONHSAT118612_smProtein_623:895 |
Length | 91 |
Molecular weight | 10130.1232 |
Aromaticity | 0.122222222222 |
Instability index | 51.2488888889 |
Isoelectric point | 7.51763916016 |
Runs | 10 |
Runs residual | 0.0287477954145 |
Runs probability | 0.013690160749 |
Amino acid sequence | MCTFAYMYVCVCTCIHMCDWQVCACICIWAHICTGMYARLCVWCVYICTCIWPHTDTGMY TPVHARLPRHTTAHLPALHPAFGLSIVAAG |
Secondary structure | LLEEEEEEEEEEEEEEELLHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEELLLLLLLL LLLLLLLLLLLLLLLHHHLLLLLLEEEELL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii iiiiiiiiiiiiiiiiiiiiiiiiiiiiii |