NONHSAT118622
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT118622 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
854 nt |
Genomic location |
chr7+:302535..303422 |
Exon number |
4 |
Exons |
302535..302881,302935..303007,303167..303234,303394..303422 |
Genome context |
|
Sequence |
000001 ACGCCTTTGG TGGTTGGCGC CCTCCAGGTC CCCCTCCCTC CAAGTCCAGT AAGAAGTTGG GCCAAGCTGG AAGGGATTGA 000080
000081 CCGGTTGCTT GTCTGGAGAT GGAGCCACTA CAGGCGGGCC TGGGCGCCTG GAGTCGGGCA TGAAAGAAAA TAGCGCCTCA 000160 000161 TCGCTCTTAT CTAAGCCCAG AGGTCCAGGG GCAACCTGAG GGCCCTGAAG TGTTTCAATA CCATGTACCA GCTTGACTTC 000240 000241 TCTACATGTC CCTTGGATTG CCCAAAAGCA AAATCTCAGA GGGGCCAAGG ACCTTCTAGG GGGGTCGTCT GCTCTGTCTG 000320 000321 GACACACAAG AACCATCATG CGTGTGAGAG CCTTTGGCAT GAGAGACACA AAGCCACAGG GAAACACATG GTGTGGAGAC 000400 000401 TGTGCTGAGA GCAGAGATGC AGAGATGCAG AGACAGCAGA GATGCAGAGA CAGCAGAGAT GCAGAGACAG CAGAGAGTGG 000480 000481 ACGAACGAGG AGGGTGTGGG GTGGCTGGGG ATGGCGTGAG GTCCAGGGAA CAGGAGGGGC TCTCGTGCAC CAGCGTGGGT 000560 000561 GGAGAAATCA AACAGGATGA AGCCTCGACA GAAAGAACAG GACACGAGAC TGAGGAAGCT CCGAGAGAGC AGCGAGGGAG 000640 000641 ACCAGTGGCT GGAAAATGAG AAAACAAAGC CACTGAGGCC CCAGCAGCAG CCCCAGCGCC GACCAGCAGG GGGCACAGGA 000720 000721 CAGAGAAGAG GAAGCGGCAG CAGCCCCAGC GCCGACCAGC AGCGGGCACA GGACAGAGAA GAGGAAGCCG CAGCAGCTCC 000800 000801 AGTGCCTAAC CAGCAGCGGG CACAGGACAG AGAAGAGGAA GCCGCAGCAG CCCC |
Predicted Small Protein
Name | NONHSAT118622_smProtein_416:658 |
Length | 81 |
Molecular weight | 8790.396 |
Aromaticity | 0.0 |
Instability index | 57.72875 |
Isoelectric point | 5.20123291016 |
Runs | 13 |
Runs residual | 0.0236842105263 |
Runs probability | 0.0396029513677 |
Amino acid sequence | MQRCRDSRDAETAEMQRQQRVDERGGCGVAGDGVRSREQEGLSCTSVGGEIKQDEASTER TGHETEEAPREQRGRPVAGK |
Secondary structure | LLLLLLLLHHHHHHHHHHHHLLLLLLEEELLLLEEELLLLLEEEEELLLEEEELLLLLLL LLLLLLLLLHHHLLLLLLLL |
PRMN | - |
PiMo | - |