NONHSAT118706

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT118706

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1378 nt

Genomic location

chr7+:1200073..1204261

Exon number

4

Exons

1200073..1200259,1201988..1202179,1202598..1203131,1203797..1204261

Genome context

Sequence
000001 CGGGCGGGCG AGGAGCGGGG AAGCTGACTC AGGGCTGCGG CCGGGGTCCT GCGGGGTAGG AGCGCGAGGC CGGCCTGAGG 000080
000081 GAGGAGGCCT AGCGACCCAT ccggcgcctc ccgccccggg cacccgcccg cggccgcgcA TCCTGCGGGC CCCAGGAGGC 000160
000161 CTCCATCTCA AAACAACGtg tttttagaga actcaagggc tgtgaaaaga gcaggacctc accagctgca cggcggtggt 000240
000241 gactggctcc atcttgctgt ccctcccaat cacacaacat ctccccttga aggctctgcc caggcccgga ctcccacctt 000320
000321 tcaagatgtc tggatcagtg caggacctcc tccttggcca catcgctctc cttggactgt gttgactcac ctgtggagtg 000400
000401 gtctgagcct gaatgcccgg ggctgtggcc accgagtgaa cgggctgtgc taaggggaat tgccaccttg ggaaacctgt 000480
000481 gtagttgcgg cttttctgat taagtatcaa taaaagtctg accttgtgaa aaaagcaaac gtgagtggcc ctgcttatgt 000560
000561 ttcaccttgc gttgctcagt gataGTTCTG CAAAGTCGCA GGAAACCTGG AATCATCTAA TTATCGTGAG TGTTGGTGAG 000640
000641 TAACACCCAT AGGCACTGgc tcccggggaa atacagagtc aggttcctcc gagccgctgg ccacagcatt tttgttaagc 000720
000721 agttcatcgt taaccttgtt gtacatgtct ctctctcaag gttccttatt taataatgtc tagttgattc attaacatgg 000800
000801 aattcatggc cagtacctct gtcactcatg cctgactgaa gttgatcagc acgtcttttt ctcccttagg cacatgacag 000880
000881 ccttcttgca atcaagaaac taCGTGTggc cagGATCTCA TCCACTATCA CAGTTTCAGC TTTCCCCAAA CTGGAATGTG 000960
000961 TCTTTGCAGA CGCCCATCCT TATTAAAGGG CAAAGACTTC TCATACACCT AGGATGGATC Ttatattctt ggcgggactg 001040
001041 cagagaaggt gccgtgtcct gagtcctcat gtcagggcac aggcttccag ccagttctac ctgggttatg tttatctcaa 001120
001121 ttccctggtg gtattggtgt ctgctgggtt ttgccagaat gaagacaccg tgttttcatt tgtcagttga ttcgtatttt 001200
001201 ccaggaagac attctgagat taCAGCATtg tcttagtcaa ggtgctgcag aaggacagaa ctaataggat atatgtacat 001280
001281 atgaaagaaa gtttatgaag aactggctca caccatcaca aggcaaagtc ccatgacagg ccatctgcaa gctgaggagc 001360
001361 gaggaagcca gcagtggc
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Predicted Small Protein

Name NONHSAT118706_smProtein_1013:1189
Length 59
Molecular weight 6517.4707
Aromaticity 0.137931034483
Instability index 40.5277586207
Isoelectric point 7.82427978516
Runs 11
Runs residual 0.0330617658204
Runs probability 0.0172231054584
Amino acid sequence MDLIFLAGLQRRCRVLSPHVRAQASSQFYLGYVYLNSLVVLVSAGFCQNEDTVFSFVS
Secondary structure LLHHHHHHHHHHHHLLLLLLEEEELLEEEEEEEEEEEEEEEEELLEEELLLEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooo