NONHSAT118721
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT118721 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
874 nt |
Genomic location |
chr7-:1478561..1480363 |
Exon number |
2 |
Exons |
1478561..1478631,1479561..1480363 |
Genome context |
|
Sequence |
000001 CAGCACTCCT TCCTCACACC CAGACCCCTT GCCTCCCACC CAGACATGAG CACCAGCCTC CAGGAAGGCC AGGAGGACGG 000080
000081 GCCGGCAGGA TGGAGAGCGA ATCTGAAGCC CGTGGACAGG AGAAGCCCAG CTGAGAGGTT AGGGATGGGT GGGGctggcc 000160 000161 cagggcctgg tacaccatag gtgcttaata aatgCAGTGA GTATGTAATC GACCGATTGA CACGCCTATC CAGGGATAGA 000240 000241 CGCACCTCCC TGTGAGTAGC AGAGGCCAGG TCACCCCTGC CTGAGGGACA TGGGGGCCGC TGTCCCTGGT TTGGGGGCAG 000320 000321 CGTTGCGTGT CTCACCTGGG CATGGCAGCA CCCGTGTGGG TTCACGCACC ATGCCTGCAG CTGGGGTGGA GTCTCCCCAT 000400 000401 GTGTGGGTCC CGTGGGGCCC GGAGCTCACG CCTGGAATCT GCTTCGCACC ACGGCAGGTA GCGATGGACA CGTGTGTTTG 000480 000481 CAGGAGGGTC CCAGCAGGTG TAGTCAGTGG GCTGGGAGGT GGCATTTGCT CAGAAGGCCA CCTGCTCCCT CCGGCTGGTC 000560 000561 TGCATATGGC CTGGGAGCCC CTCCAGGTGG GCCAGGCCCT GGGGCTGGTG GTTCGGGTTC CGACCTCATG CCTTCTGCCC 000640 000641 AGGACTCTGA AGCCCAAGGA ACCACGGGCC CTGGCAGAGC CGAGGGCGGG GGAGGCCCCC AGGAAGGTCT CAGGCAGCTT 000720 000721 TGCTGGGAGT GTCCACATCA CCCTGACCCC CGTGAGGCCT GACAGGACCC CACGCCCAGC CAGCCCAGGA CCCAGCCTCC 000800 000801 CAGCCAGGTC CCCCTCCCCA CCCCGCCGCA GGAGACTGGC CGTCCCTGCC AGCCTCGACG TTTGTGACAA CTGG |
Predicted Small Protein
Name | NONHSAT118721_smProtein_341:460 |
Length | 40 |
Molecular weight | 4200.8133 |
Aromaticity | 0.0512820512821 |
Instability index | 67.0871794872 |
Isoelectric point | 10.3461303711 |
Runs | 7 |
Runs residual | 0.0107466063348 |
Runs probability | 0.037524919878 |
Amino acid sequence | MAAPVWVHAPCLQLGWSLPMCGSRGARSSRLESASHHGR |
Secondary structure | LLLLEEELLLHHHLLLLLLLLLLLLLLLLHHHHHLLLLL |
PRMN | - |
PiMo | - |