NONHSAT118803
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT118803 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1272 nt |
Genomic location |
chr7+:2482220..2486534 |
Exon number |
3 |
Exons |
2482220..2482409,2483258..2483381,2485577..2486534 |
Genome context |
|
Sequence |
000001 gatctcctga cctcgtgatc cacccacctc ggcctcccaa actgctggga ttacaggcat gagacaccac gccccgccga 000080
000081 gtccctgctt ttaattcttt ggggcaggga tccccaaccc cctggtgatg gaccaatact ggcctgcggc cccttaggaa 000160 000161 ctggactgca cagcaggagg tgagcggcag ATGGCATGGG AAAGTAGCAC ACAGTCGGGA CTCTGCAGCC GAGTTTGCCT 000240 000241 CCTTGAATGC ACACATAACA CAGGAACAAA GACAGAGCTG CTTCCCTCCT GTTGGGTCTC TGGCGGACAG TCAGTCTCAT 000320 000321 TTCCAGATGG GGAAAGGGAG ACCCAGGCTG CGGTGACCCA CTGAGGCACA GGATCAGTGA GAACCCAGCC CTGGCTTTGC 000400 000401 CCAGACCTCT CAAGGGCACT TCGTGGGACC ATTGCCGGCC GTTGTGGCAT CTGTCCCTGG CCTTGCCCCC ATCCGTCTCT 000480 000481 GCACAGCCCA GGTGGGTCCG AGCCAGCCCC AGGTCTCCAG GGTCCCAGCC CAGCCTCTAG AAGAGCCAGC AGCAGGGCTG 000560 000561 GAAGGGAGAG CACATGCTGG GCCTTGGGGC TGCCTTGGAC CTCAGGCCGT TGACAAGGAA AAGCGGAGAG TTGGGAAAAA 000640 000641 AGGACAAATA GCTGAGCGCC AGCCGCAGTC TGGGGGACGG GAGCCTCGTG CGACTCTCGG AGTGCTGGCC AGATTGGCAG 000720 000721 AGGGGAGGAG AGAGGAAAAA CCCAGGCTCT GAGGAAAAAC CTCTCCAGCC CAGCGCGTGG CCTGGCATTA ACCCACTGCA 000800 000801 GCCCCAGGAA GTGGTTCCAC CCCAGGCAGC CAACAAGGCG GTGCCTGAAC TATGTCTGTG GATGACGGAG CCACGACCTG 000880 000881 TCCCTCAGGG CTCAGCGCTG CGGCTATGTC CAGGGACCCC TGGCTGTGCC CACGTCGGGG CTTCCCGTTC CTTACCTGCC 000960 000961 ATGAGAATGA GATGTCCAGG GACCTCCCTG CTCCAGCTGG GACCTGTGGG GCTTTGTCTG TTGTCCCGAG CACCTTGGAG 001040 001041 ATGTCATTTC TAACATTTTA ACCCAGGAAT CCCCCCACCA AGGGACAGAG TGCAAGGACA TGATCGAACA GAAAAAGTTC 001120 001121 TGGTACAAGA TCAACCCCGT GGGGTGGTGA GTGCTGCAGC CCCGGGCCTC ACATCCTGCC GTCCCTGTGG GAGATTGGAG 001200 001201 CGGTCCCAGT GCCCACCGCT GATTCTCTGG CTCCAGCAAC CCCTCCAGGT GGATCCGTCC CACGCAGCCT GG |
Predicted Small Protein
Name | NONHSAT118803_smProtein_851:1060 |
Length | 70 |
Molecular weight | 7309.2985 |
Aromaticity | 0.0724637681159 |
Instability index | 79.6072463768 |
Isoelectric point | 4.64642333984 |
Runs | 9 |
Runs residual | 0.0088965418281 |
Runs probability | 0.0360360360361 |
Amino acid sequence | MSVDDGATTCPSGLSAAAMSRDPWLCPRRGFPFLTCHENEMSRDLPAPAGTCGALSVVPS TLEMSFLTF |
Secondary structure | LLLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLEELLLLLLLLLLLLLLLLLLLEEEEELL LLEEEEEEL |
PRMN | - |
PiMo | - |