NONHSAT118917

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT118917

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2937 nt

Genomic location

chr7-:5467807..5476343

Exon number

4

Exons

5467807..5468558,5468717..5469269,5471212..5472165,5475665..5476343

Genome context

Sequence
000001 CCTTTTTCTT TTTCTTTTTT TTTAAAGATA ATGTCTTGCT CTGTCACCTA GGCTGGAGTG CAGTGGCATG ATCATGGCTC 000080
000081 ACTGCAGCCT CGAACTCTGG GCACAAGAGA GCCTCCTGAG TAGCTAGGAC TACAGGAGTG CACCACCATA CCTGGCTAAT 000160
000161 TTTTTTTTTG TATAGATGGG ATCTTGCTAT GTTGCCCAGG CTGATCTCAA ATTCCTGGGC TGAAAGGATC CCTCTGCCTT 000240
000241 GGCCTGGCAA AGCGCTGGGA TTACAGGCAT GAACCACTGT GCCCAGATGA CCCCATCTTT CAATAGGAGG AACTTTTTAG 000320
000321 GGCTGTGTTC TCATGCCACC ACAACCCAGG GGGCCAGATT AGCTGAGGAC GTGTCCTCTA AGCCCTTCTG TGTCCCTTCT 000400
000401 GTTTTCAGTT TCTCTTCTCT ATGAGTATCT CTGTCTCCTT TCCTTGGAGG TGACAGAGGG CACCCATGTG CCCAGGCTCA 000480
000481 CCCAGGCAGT GGGTGACACC AGTGGGTGAC AATGTGGATG GCCCGCCATG CCAGACACTC ACTCCAATGC CCATTTTACA 000560
000561 GATGAGAAGA CTGAGTACTG AGTGGCCAGG TAGACTGAGC AGGATCGCAG AGGGAGGATT TGTTCCGGGC CAATCCCCTT 000640
000641 GTTTCCCATC CATGTTCCCT ATCCTTGGCA ACTTGGGGGG GGTTAGGAAT CAAATACATG AATTTGGGGG GGACTTTCTT 000720
000721 CAATCTACAA CAGAGGAGGA TCTGCGGGAA TGGGGCCAGG TGAGGAAGGC AGGGGCAGGG GCAGGTGGGG GACAACCGGA 000800
000801 CCCCTCCAGC AGATGGAACC AAGTGAACAG GTCTTTCTGG CAGGAGCAGC TCTAGAAGAT TCTTGTTTTG TTTTTTTGGA 000880
000881 ATGGAGTCTC GCTCTGTTGC CCAGGCTGTA GTGCAATGGC ATGATCTTGC CTCACTGCAG CCTCCGCCTC TCGAGTTCAA 000960
000961 GCAATTCTCC TGCCTCAGCC TCCTGAGTAG CTGGGACTAC AGGCACCCGC CACCAAGCCC AGCTAATTCT TGTATTTTTA 001040
001041 GTAGAGACGT GGGTTTCATC ATGTTGGCCA GGCTGGTCTC AAACTCCCGA CCTCAGGTGA TCCGCCCGCC TCGGCCTCCC 001120
001121 AAAATGCTGG GATTACAGGT GTGAGCCACT GCGCCTGGCT TAGAAGGTTC TTTAGAGAGT CTCCATGGCC ATAGAAGCTG 001200
001201 GTGTGTGAGT GCCTGTGTGT GTGTGAGTGC CTGTGTGTGT GCCTGTGTGT GTGTGCCTGT ATGTGTGTGT GCCTGTATGT 001280
001281 GTGTGTGCAT CTGTGTGTGT GCCTGTATGT GTGTGTGCCT CTGTGTGTGT GTGTGTGTGT GTGTATGATA GGATTCCTAC 001360
001361 CTCGTGCTCC TCTCTGGGGT GAAGGCAGAC CAATACATGA AGAGAGAGTG GAGGGCAGCC GGGAGGGGGC CTGTCAGGCT 001440
001441 TGATCTTTGT GGGTTTGTTT TTGACTTGAC GCTGGCTCTA GAAATGGATT GACATTGGGG TGGGCGTGGG ATGGAGGCTG 001520
001521 ATAGGAGAGG GAAGCTTTCA AAGCTGTAGC CATGGGAAAT GTTTTTATTT TCTGCTTGAA AGAAAATGCC AAAGAAGGAT 001600
001601 AAAAAGGAAA AAAAGGTGGG GGGAGGTGAC TCGCTCTTCA GCAGGCGCCC CCGGGAGCTG ATTTATTGGC GGTTTATTTG 001680
001681 GAGAAACGCT ATCGCTCTTA GATTCTGGAG GGGGGAAAAA ACACGCTCGC GGTGGACTTT AACCTTGGGC TGAAACCACA 001760
001761 GCGCTTTGTT TTCGGAGGTG CTTCCTGGGG CGCCGCGGCA GGGCTGGGGC CTAGCGGGGG AAGCTGGGCC GGAATGTGGC 001840
001841 CCAGCAGCCT CTCCACTCCC AGGCTGCGCT TCTGCCTGCC CGGGCAAGCG CTCAAATTCC TCTGGGCCCG GCCGGAAGCC 001920
001921 CTCGGTCCCT CCAAAAGTGC TTCTAGAAAT TCTAGGAAGG AGCCGAAGCT CCTTGGCTGA GGGCGTCCTT GGAGCGAGGT 002000
002001 TTCCAAACCC TCCCATCCCA AGCCCCCGGC ATGTGCCACC CGCCGTTTGC AGTCGTGTCA CTGGCATGGT GAGGTTTTCG 002080
002081 GGAGGCATCC ATGAAGGGCT GAATGCTCCG GTTTCCGTGC ACCTTAAGTC TGGAGCAAAA CCCCGCTGGA GGTGGTTGGC 002160
002161 TCCAATCGCG CCCATGGTTT GCTTGATTCC CGCTTTCCCC ATTGCTGAGC CAAAGCTCGC ACCAAGGAGG GCTCCAAGCC 002240
002241 GGGACCCCGG TTGGAGAAAA TCCTGGGGCA TCCAGCGGCA CGGAGGGTGG GAACCAGATG AGCCTCCGCC TCCGCGCACG 002320
002321 GTGCCCACAG TCACACCCCC CGTTGGTCCA CCTGTGCCAA AAAAAAAAAA AAAAAAAAAA AAAAAGGCCC TTCATGCGCC 002400
002401 CGCAGAGGGC TCTGAGGAGG CACGAGATGA AGGCAGGGTC CGCGGAGAGG TGGCAAGCTG AATTCTGAGA AGCCGCTCTG 002480
002481 ACCCTGACCC TGGGGTCACC CCTCCGTGGT GCAGGTGGCA CCGGAGTTGG GCTCGAGCGG AGAGCCGCAT GCCCATCCCA 002560
002561 GTCTCACCGA GCCTTCCTAG GAGGAAATGC CAGGCCCGGG CGCCCCTACC CCAAGGCGGT GATCCTGTGA AGCTCGGGCC 002640
002641 ACCTCAGGGT CCAGCGCCCT CAGAGATGGA TGGTGTTGAC ACCGAGGAAC GAGGCCGTTC CCTCTCTTTG GTGAACGGAG 002720
002721 AAGCTCCTGG CGTGGTTCCC TGCGCAGTCT CCGGGTCCCC AGGCCGTGAT GGGGTGAGCA GGGTGCGCGG CGTGGCCCGG 002800
002801 GACACGAGAC CGGCCCGGAG CACCCCGGCG TGAGCAGCGG GAAGGAGGGC CCGCCCGGAG ATTTATGGCC GCAGCCGGCC 002880
002881 CCCTGTGCAC TGAGCGCGTC TCGGTCCTTT CCCAGCCAAA CAGTGGAGTG GAGGACC
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Predicted Small Protein

Name NONHSAT118917_smProtein_2297:2467
Length 57
Molecular weight 6793.113
Aromaticity 0.0535714285714
Instability index 86.4178571429
Isoelectric point 11.7346801758
Runs 9
Runs residual 0.00741608118657
Runs probability 0.0472433217532
Amino acid sequence MSLRLRARCPQSHPPLVHLCQKKKKKKKKRPFMRPQRALRRHEMKAGSAERWQAEF
Secondary structure LLLEELLLLLLLLLLHHHHHHHHLLLLLLLLLLLHHHHHHHHHHHLLLHHHHHHLL
PRMN -
PiMo -