NONHSAT118940

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT118940

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1642 nt

Genomic location

chr7+:5862791..5887232

Exon number

6

Exons

5862791..5863157,5870812..5870914,5873158..5873199,5879580..5879706,5880321..5880487,5886397..5887232

Genome context

Sequence
000001 TGCTTTTACG CAGTGTTTTG AGGTGCAGGA CTGCAATGCC CGCACTTCCG GACCCCAGAC TCTTCCTACG GCGACTGACA 000080
000081 CCTCAGACAC GCGTTGTGGG GGGCGGCGCT CTGGCTCCGG GGCTGTGCCC AGCGCGAGCG TGGCCGGCAC CCACTTGCTG 000160
000161 CAGAGCCGGC ACTGCACTGG GGTTCTTGGG GGCGGCTCCT CCAGACGTCT CTGCGGGTTG TCGGGTGCTG CCGAGTTGGG 000240
000241 TTGGGGGACG CTACAGGTAG TGGGTCCGGA GCAGCGGCTG GCCCCTCATC TCACTGCCCT TCCTCGGACC CCACCGTCCT 000320
000321 CTGGAAGCTT GTGCAGGGCA CCTGCCACTG TGACCACCTG GACGCAGTGG GTTGTTTTTT CCGTTTCCAT CTCTGGCTAG 000400
000401 TCTTGAAGGC TAGACTTGCG TAGGAGAGCA GACACGAGGA CATGAGCCAG TTCTGCTGAG CTGTTACTGT ATACCTGCTT 000480
000481 TCCCACAACA GCAAGGAAGA ACCATGGCCC AGGGGTCACT GTCATTCGGG GACGTGGCTG TGGGCTTCAC CCGGAAAGAG 000560
000561 TGGCAGCAGC TGGACCTGGA GCAGAGGACC CTGTACCAGG ATGTGATGCT GGAGAACTAC AGCCACCTGC TCTCTGTGGG 000640
000641 CTGAACTGTC TGCTTGCTTG GAAGGCCCAG CTGGCTCAGC ACAAATCCTT TAACCGTTTC TCCCCAAGAG GGTGTCAAGT 000720
000721 CAGCAAACCA GCTGTGATCT CCAGTTTGGA GCAGGGGAAG GAGCCATGGA TGGAGGAGGA AGAGATAAGG ACGTGGAGCT 000800
000801 TCCCAGAAGA AGTTTGGCAA GTTGCTACCC AGCCAGATAG CCAACAGCAA CACGAAGACC AACATTTGAG CCATACGTTT 000880
000881 CTAGACAAGA AAGACTGGAC CGGAAATGAG CTTCATGAAT GTAACGAACT TGGAAAAAAA CTCCATCAGA ACCCAAACCT 000960
000961 CCTTCCATCA AAACAGCAGG TCCGCACACG TGACTTGTGC AGAAAGAGTT TGATGTGTAA CCTGGACTTC ACTCCTAACG 001040
001041 CCTACCTGGC GAGGAGGAGA TTTCAGTGCG ACGGCCACGG AAACTTCTTC TCTGTTCGAA ACTTGAAACT CCACCTTCAG 001120
001121 GAGCGAATCC ACGCGGAGGT CACCAGTGTG GAAGTGCTTT AAGCTGTGAC GAGGGAGTTC CTGCAGCTCA GGGAGCCAGT 001200
001201 AGTGAGAAAC CCCACGAATG CACGAAGTGT GGGAAAGCCT TGTGCTGCAG ATCGGACCTC AGGGTACATC ACGGGGTCCA 001280
001281 CGCGGGGGAG AAGTCCTCTG CGTGCAGTGA ACGGGGGAGT GGTTTCAGGG AGAAGCTTTG CCCTGACAAA CAGGGAACTC 001360
001361 ACACAAAGGA GAAACCCGCT AGAGACAGCA GAAGTGGTAA AACGATCTTC CGGAAGACAC GCCTGTGTGT CCCGGGCACA 001440
001441 GTTCACGCCG GAGCGAAGCC TTACAAGTGT TGGGAGTGTG AGAAAACCTC CCACAAGTCG CGCCTCATCG AGCACCTTCG 001520
001521 CTCCCACACG GGGGAGAAGC CCTGCGGCTG CAGGGAATGC GGAAAGGCCT TTTTCCAGAA GTCACACCTC ATCCTGCGTC 001600
001601 AGAGGACTCA CACGGGGGAG AAGCCCTGCG ACTGCGCGGA GT
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Predicted Small Protein

Name NONHSAT118940_smProtein_35:259
Length 75
Molecular weight 7668.9795
Aromaticity 0.0675675675676
Instability index 49.1364864865
Isoelectric point 11.1419067383
Runs 11
Runs residual 0.00599868160844
Runs probability 0.0459122223828
Amino acid sequence MPALPDPRLFLRRLTPQTRVVGGGALAPGLCPARAWPAPTCCRAGTALGFLGAAPPDVSA
GCRVLPSWVGGRYR
Secondary structure LLLLLLHHHHHHHLLLLLEEELLLLLLLLLLLLLLLLLLLLLLLHHHHHHLLLLLLLLLL
LLEEELLLLLLEEL
PRMN -
PiMo -