NONHSAT119145
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT119145 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1475 nt |
Genomic location |
chr7+:8043527..8126569 |
Exon number |
6 |
Exons |
8043527..8043689,8062113..8062199,8095066..8095179,8099726..8099878,8110551..8110761,8125823..8126569 |
Genome context |
|
Sequence |
000001 ACTTTCTGTA GCGGACAAGG CAAAATCTCA GCAAGTTCGG ACCTCTAGTA CAATAAGGCG AACCTCCTCT TTGGATACAA 000080
000081 TAACAGGACC TTACCTCACA GGACAGTGGC CACGGGATCC TCATGTTCAC TACCCTTCAT GCATGAAAGA CAAAGCTACT 000160 000161 CAGACACCTA GCTGTTGGGC AGAAGAGGGT GCAGAAAAGA GGTCACATCA GCGTTCTGCG TCATGGGGGA GTGCTGATCA 000240 000241 ACTAAAAGAG ATCGCCAAAC TGAGGCAGCA ACTACAACGC AGTAAACAGA GTAGTCGTCA CAGTAAGGAG AAAGATCGCC 000320 000321 AGTCACCTCT TCATGGCAAC CATATAACAA TCAGTCACAC TCAGGCTACT GGATCAAGGT CAGTTCCTAT GCCACTGTCA 000400 000401 AATATATCAG TGCCAAAATC ATCTGTTTCG CGTGTGCCCT GCAATGTAGA AGGAATAAGT CCTGAATTAG AAAAGGTATT 000480 000481 CATTAAAGAA AATAATGGGA AGGAAGAAGT ATCCAAGCCG TTGGACATAC CAGATGGTCG AAGAGCTCCA CTTCCTGCTC 000560 000561 ATTACCGGAG CAGTAGTACT CGCAGCATTG ACACTCAGAC TCCTTCTGTC CAGGAGCGCA GCAGTAGCTG CAGCAGTCAT 000640 000641 TCACCCTGTG TCTCCCCTTT TTGTCCCCCG GAATCCCAGG ATGGTAGCCC TTGCTCAACA GAAGATTTGC TCTATGATCG 000720 000721 TGATAAAGGT CTCGTCAGCC TATCTCGGCC CCTCTCTTTT CATGTCCTGA CAAAAACAAG GTTAATTTCA TCCCAACCGG 000800 000801 ATCAGCTTTC TGTCCTGTAA AACTTCTAGG CCCCCTCTTA CCTGCTTCTG ACCTTATGCT CAAGAACTCC CCTAACTCTG 000880 000881 GCCAGAGCTC AGCTTTGGCA ACTCTGACCG TTGAGCAGCT CTCATCCCGG GTTTCCTTTA CGTCTCTTTC TGATGACACC 000960 000961 AGCACAGCGG GCTCCATGGA GGCCTCTGTC CAGCAGCCAT CCCAGCAGCA GCAGCTCCTG CAGGAACTGC AGGGTGAGGA 001040 001041 CCACATCTCT GCTCAGAACT ATGTGATCAT CTAAAAAAGG GGGAGCTGGC CTCCACCCTA TGTTCCATGG ATTCGGAACA 001120 001121 AGATTTCAGA CATCTGCATG AGTGACAAAC TTTCTGAACA CCACCACCAC CAATAATACT TATCAGCATC ATAAAGTATC 001200 001201 TCTTAAACAC TGATCTTGGC AGGGACGGAA CTCCTATTCA GCAGTTTTTG TGGAAAGCAG TAATGCTTGC AAAACGTGTG 001280 001281 TGTCATTCAG CATTTTAAGT GGAGACTATG CATTTCATAG TATATTTGAC AGATTAGTAC TGTGTCCTGT GTTTTGTTCC 001360 001361 AGATTCTTCA GTATAAATAA GCTCTATATC AAAAAGTTGC CTGTCTAAAT AGAAAATGTC TTGCTGTGTT TTGTCCTATG 001440 001441 GAAAATACTG TAATTCAGGA TTATGTTTAC AATTG |
Predicted Small Protein
Name | NONHSAT119145_smProtein_494:769 |
Length | 92 |
Molecular weight | 10026.0455 |
Aromaticity | 0.0769230769231 |
Instability index | 46.6901098901 |
Isoelectric point | 10.6653442383 |
Runs | 7 |
Runs residual | 0.0565476190476 |
Runs probability | 0.0490196078432 |
Amino acid sequence | MGRKKYPSRWTYQMVEELHFLLITGAVVLAALTLRLLLSRSAAVAAAVIHPVSPLFVPRN PRMVALAQQKICSMIVIKVSSAYLGPSLFMS |
Secondary structure | LLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLL HHHHHHHHHHHHLEEEEEELLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL LLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTooooooooooooooooo ooooTTTTTTTTTTTTTTTTTTiiiiiiiii |