NONHSAT119218
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT119218 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
669 nt |
Genomic location |
chr7+:11379524..11382344 |
Exon number |
2 |
Exons |
11379524..11380122,11382275..11382344 |
Genome context |
|
Sequence |
000001 ATAGAGCAAT TTAAGAGTTC TGCTTTTTTC CTTGTTTCCT GTGAGGGATG GAGACTCCTC ATTGCTGGGG TTTCATTATA 000080
000081 AATGTGACCT CAACTGACAT GGCATCTCTT AATAAGGGGC AAGTCCTTCA TGTATTTTTG ATAGTGCACC AGTGACAAAA 000160 000161 TCCCTCTCAG TTTAGCAGAA AAATACCGCA AGAGTAAATT GTCAATGACA ATATCAGTAT ACTCACTGGG CTTCAGGGAT 000240 000241 TAAGTGAATA GCAGCCATGG CCAGACCCTG ACATGGCTTC AGGCACTTAA AAAAAAAAAA AAAAAAGCGG TCAAATTAAA 000320 000321 GCCACATATA TGAGGGGAGG GAAGCCTTCC TACCCCAGCA GGGAGATACC TTGATTAAAG CTCAGTCTGA CCTTCCTGCT 000400 000401 TCATCTCCAC AGAAATTGAG ACACATTTCC TAAATGGCAG GACTTTACAG AATCATAATG AGCAAGGACC AGGATGCTTT 000480 000481 GCGTTAAATT TCCATCTTCA TTCCTGGAGC AGGCAAAGGA GAAAATAAGA GAAGGTCTCT ATTATTTGTT ATCAAAAGAA 000560 000561 CAATGCAGCC CTCCCCTGTT TCTTTTGTGC AGAGACAGAT TTTTGTAATA GCGTACGTGA TGATGCTTGT ATTCTATTCC 000640 000641 ACATTATTCC TAATGATGTG CTATTCAAT |
Predicted Small Protein
Name | NONHSAT119218_smProtein_473:607 |
Length | 45 |
Molecular weight | 5241.2207 |
Aromaticity | 0.136363636364 |
Instability index | 41.1022727273 |
Isoelectric point | 8.56890869141 |
Runs | 7 |
Runs residual | 0.00401069518717 |
Runs probability | 0.01676886971 |
Amino acid sequence | MLCVKFPSSFLEQAKEKIREGLYYLLSKEQCSPPLFLLCRDRFL |
Secondary structure | LEEEELLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLEEEELLLL |
PRMN | - |
PiMo | - |