NONHSAT119413

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT119413

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2070 nt

Genomic location

chr7+:20257029..20261317

Exon number

3

Exons

20257029..20257245,20257879..20259379,20260966..20261317

Genome context

Sequence
000001 CAGGCAGGCA ACTGCACCCC TGCTTCCTGA GCCACCTGGG ACTTGAAGTT CTACCACTGT GGCTCCAAAG CTGCCCAACT 000080
000081 AGAAACCCCA AAAGGCAAGA GAACTACGAT ACCCACAATT CAGGCTCCTC ACCCGAAACC AGAAGAGGGC GTATGGCTAG 000160
000161 AGTTTCACCC TAAGAAGAAA GGGGAAGCAG GTGGAAAAGC AATTAAAAAA AAATCAGCAT CTCTCTCTAG CCTATTATCT 000240
000241 CCTGTTAGAC ACAGCCCAGA AAATGAATAG AGACAAGTCC TGGCTGGGTC TGGGTTCAGA AACATAATAG AAGGATTCAT 000320
000321 CTAATGTAAG TAGATGGCAG AATGGTGACA AAGAAAAAGT TTCCTTTCCC TTTTCTGCAC TTTCTCTCCT ACTGTTCTAA 000400
000401 CCACCCCTTC CTCCCTGATG CATCCCTGGC TTCATGCTGC CAGATCACCT AATCCACCCA GATTCCCTTT GAAGTTTCCC 000480
000481 CTTGACTCAT CCCACAATCC AAACTGAGCT GTTCTGTTTC TTTTTGTCAC AGGTTCCTCA ACTCTCTACT AGAACCTAGC 000560
000561 TTTCCTTTAT GTCATTATAT TATTTCCAAA ACAAATGGTT CTTAATTTCC CCAAACCCTA CAGAGGGCAT TCTGCATGGC 000640
000641 ATTTCTCCTC CCTGAAACCA TTTTTGCTCA TCTTGAAATG TTCAGAGATT TCATTTTTTC CAAAGCTCAA TGAAAAACAC 000720
000721 TCTTCAAGAT GTCCTTCTCA GTTTGTCTTA ATCTGAGTTA TTCTCTTCCT CCTAATCAAT TTCATAATAT TGCATCTGCT 000800
000801 CCTCTCATAA CACATTGTAT ATCTCATTTC ATTGGTTTAC ATGGGTGTGT GTGTACCTAT GCAGTCTTAC ATTCCTATTT 000880
000881 GAAGGCAAGG CCTCATTGTA TCCCTACTTC ATTAACTCAT TAATGTACAA GTAGATGTTT GTGATAAACA ATCAACACAT 000960
000961 AAAATAACTG AGATGTTAAC TCTAAGGTGT GTGTGTGTTA ATGCCTAATG CCATCTTTAT GTCTCCCGGA AAACATTTAC 001040
001041 ATTTAAAAAG CTACCTAAAT GCCATGCATG AGTACTGTTA TCAGAATCCC CCTGCAGTCT GGTCTGGTGT GGCTCCCACA 001120
001121 GCCTTTATTT GCAGAAAGGC AAAGCATTAA ATCTAGCAAT TGAACCCTTG ACAGTACCCG AAATGAAAGC CCTAGTGGGT 001200
001201 CAGCACTCAC TGTTTACCAG CTCCAATCCC TGCTGTGCAC TTGCCTTTCT AACAGCTCCC CAAGGACTGG GCTCCCTAGA 001280
001281 GTCCTCAGTC CCATGGTCCT GGAAACCTGG CCCTACCTCT ATCTATGATT TTTGATTATC AGCTCCAGCA TTTATGGATC 001360
001361 CCTTCTCCTA TTATCTAATC TACGGGCTCT AAAGATTAAA CTGTGCACTT TGGACTATTT AAATAGTTCT TAACCACTGA 001440
001441 TCTCCTCCCT CAGGGAAGGG AATTCTTTCC ACAGTTGCTA GTTCCTCACA CCTCTGCCTC TATGGGATTC TCCTGGTCCC 001520
001521 CACATGCTCT GCTGTGTCTT CTAGCTGTCG GCCACTGTGG AGGAAGTGAA CCTTCTAGAT CCTGCTGACT CATACAATGA 001600
001601 GTTTTGTGTG GACCATCAGA CAAAAGGGCT GGCTGGTGAA GGTGGCTGTT GTCTGGAAAT TCCTCCCAGC TCTCCTCTAA 001680
001681 TTATGTCATA AGGACTGGAG GCCCCTTAGC CTGCTTGTGA TAACACGCAA GGAAATATGG GCCAACTCTT CACATGAACA 001760
001761 CAAGATATTT CCATGCTAGC CTTTTGCAAG TAACAACAGA GAGAGCTCTG TGCAGTTTTC ACTGGAATGC CTGTGGATTG 001840
001841 CTTGTGTCAT AACTGTAATC TAAAGAGTTG TCCATTTGTT GATTCCTTTG TATTTGTATT GGTAGAATTG CCACTATCAA 001920
001921 ACCAAGATCT TTAGCTGCCT TTGTATCAAC TTCTTTGGAG CTTATGTGAT TTTCCAGAAA ATTTCCAAGG CATAGTTTTG 002000
002001 TCCCTAAGTC CCATGAATAT GTAATATTTT GTGTCTCTCT ATTAAAATAG CACTTTTTGT GCATTCCATT
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Predicted Small Protein

Name NONHSAT119413_smProtein_728:922
Length 65
Molecular weight 7064.2029
Aromaticity 0.09375
Instability index 42.5640625
Isoelectric point 8.38299560547
Runs 7
Runs residual 0.03921875
Runs probability 0.0461932520757
Amino acid sequence MSFSVCLNLSYSLPPNQFHNIASAPLITHCISHFIGLHGCVCTYAVLHSYLKARPHCIPT
SLTH
Secondary structure LLEEEEELLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLLHHHHHHHHHHHHHLLLLLLLL
LLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL
LLLL
PiMo ooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiii
iiii