NONHSAT119478

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT119478

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2609 nt

Genomic location

chr7-:22689579..22705152

Exon number

5

Exons

22689579..22690772,22692565..22692770,22692866..22693033,22702701..22703535,22704964..22705152

Genome context

Sequence
000001 GAGGTAGCCT TGGCGACTTT CGAGACTACC CAGGCCGAGC ACACCCAGCC CCCTCAGACC CAGGCATTTC TGCGTCCTCT 000080
000081 GGTTTGGAGG GAACCCAGGG GGCTGAGGTG AAGCAAGCCA GGACTGTTTC TCTGACTCTT CTGGAAGACG ACCCGCTGCT 000160
000161 CGGGCCGCCT CATCACTGCG GGCCACGAGT GCCCTTCTTC ATTCCAGACA TGGTGCTTTG AACAATTTGA CTTGGAGGCA 000240
000241 AGATTGCGAT ATAGAAAATG GGCCACTGTG GAGGAGATAA GTAAATGCTT TGTCGCTTCT AAGTGACAGA GGAAACTGAT 000320
000321 CACGATTGGT ATACTTCTGA CATGTAACTT TCTATATCTT TAGAAGATCG TCAGGGAAAT AGAAAAAAAA ATCTGAAATC 000400
000401 TCCAAGTAGG TTCTACTTTG TGTGGTTCCA ACTAAATGAA CTAAATTTGT GTTTAAAGAT TGTAAGTCTA CATGTAATGG 000480
000481 TGAAAGCTGA AGGTTTTACA CTGCACAGAA ATAGTGATTT CCCCCCGTGG AGGGCAAGAA GACCGGAATA GGAGGGGTGG 000560
000561 GTAGGGGAAT CAATGTGTAG GCCAAATATT TGAAATTTCA GTGCAATCTT CTTAGTCATC ACTTTCATTT CTGTCTTCTA 000640
000641 GGGAAATCTG ACACAGCTAG AAAGCAATGG AAAACACTAA GAGTTGCATC AGATGTTGAA GAGGAACTGA TATTATGGGA 000720
000721 TAAAAAATGA TTCTTTAAGG GAGATAACTG GTCATTTAAA GGTAGCAGCC TTTTTGGGAA AAGCTAACAA GTGTTCCCGA 000800
000801 GGCCAGCCTG TCTCTTGTTA GCAACATTGG CCCTGTGTTA GAAGGAAGAG TGGATGTGTT TTGATGCTAT TCCTTTTCCT 000880
000881 CTCAGCATAA ATTTGCAAGC ATGTACTGTA AATGAATTTT CATGTCTTTT CAGGATGTTT CCCTATAGAG CAGTTTCTAG 000960
000961 ATTGACTCTG TGGAACAGTC TACAATAGAT TTAATATGGT TAGGATTTTG CCTAATTCTG ATTGTAGGTC TGGGTGAGGC 001040
001041 CTGAGAGTCT GCATTTTCAA TAAGCATCTA GATAGTGCCT GCTGTTTATG GACTACACTT TGAATAACAA GGACTTAGAA 001120
001121 GATGAAGAAC AAAGAGCTTC ATATAGATCA GCAACACTCT TTGGTGTTCT TCCTCCTGTG TTCAAGTCAG TGATTACATA 001200
001201 TCCTTTTTGG ACCTCAGTTT CCAGTCCTGC CAAATAAGGG ACTAAGGCTG GATCATGTTT CAAGCTGTCC TGAAGAGACC 001280
001281 TCTAACTCTG CAGAGAAGCC TCAGGACCCC ACCCCCTCAC CCCAAGAAAA GTGTGAGGCT AGTGTGAGGA GGAAGAGGAG 001360
001361 CAGAGAAGCC AATGGAGAAG GAACTATTCT TTAGAAAGGT TTCAACGGTG ACCTGCCAAC AGCTCCCAAA TCTACAGGTT 001440
001441 TCACCCAATT TTTGACTCAT GACCTGTTGA CAACCTCCGC CTGGATATGT CATGGGTTTC CTCAAAACCC AACATTTACA 001520
001521 AAACTGAACA TCCTCAAAAC ATCTTCCCTT TCTCACCATT CCTCTCAGTT AACAGCATCT CCATATACTC CATCACTTGG 001600
001601 GTGGAACATA TCAGAGTCCA CTTAGCTTTC TTCACAAGCC TTTAATGGAG GAAATATTTA TTGAGTATCT ACCATGTGCC 001680
001681 ACCCACTGTG CCAACCACTG TCCATATGAT GGTGAATAAC CAAGACAAGG GCTTGCTCTC ATGGAGCTTG CAGTCTTGTG 001760
001761 GAGAAAAAGA TAATAGAAAG TAAAGACATA CTTTACTTTC AGGTAGTGAG TAGTGCTGAA AATAAAGCAG TGGGAGAGAG 001840
001841 AGTGATAGTG GAAGCTACTT TAGAAAATGT AGCCAGAGAG GGCCTCTCAG AGAGACCACT TGAATGATGA GAAGGGCCGT 001920
001921 GAAAAGAAGG GGGATGATAA AGGAAACTGC AAGTACCTGA GCCCTGAGAC AGTTAAAAAA AACATCTGAG AGACCAGTGT 002000
002001 CTGGAGTTTG GGCTGAGCAG AGATGAACTT GGCCAAACCA CGCTGGACTT GTACAATGTG GTAAAAATGA TGGATTTAAC 002080
002081 TGCACTTTAT CTTAATATAT CTCTTTTATC AACACCTTCC TTTCCACGCT CCCAGCCGCA TTGTTTATCA AGAACCTGTT 002160
002161 ACATTTCACT TGACTATTTA CCTTCTCAAC TTTTCCAACT CCTCTTCCTC AGGCACCTTT GCTGGCTCTT CTCTTTCTCT 002240
002241 CTTTACCCGC TATCTCTCAG CAGGCCTCAG ACTTCTCTCC TGTCTCTCCC AAGAGTGCTA CCCTAGACCA GCCTGCCTCA 002320
002321 GATTCTGTTT CGGCCTAGAA GGGCCAAACA TCTGGTTTGT CATCTTCCTT GGGTTTTAGC ACATTATCAC ACACACATTA 002400
002401 GGTCTTAGCA CATTATTAGA ACTCGCAAAT CCCTTATTTG ATAGAAGAAC TGATTTCCTT TTTAACCCTA ATTCCTCTCC 002480
002481 CCTACCCCCA TTTGAATGTG TATCTTTTCA TTTGGATGTG TTCTTGTGGA ATGTCCATTT TATTTGTATG CACTTATTTT 002560
002561 AAATTCTGTA AATGATATTA TAGTATCCCT TCCAAAAAAA AAAAAAAAA
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Predicted Small Protein

Name NONHSAT119478_smProtein_2066:2305
Length 80
Molecular weight 9162.7848
Aromaticity 0.126582278481
Instability index 63.853164557
Isoelectric point 9.05584716797
Runs 7
Runs residual 0.0516733136813
Runs probability 0.0421051303405
Amino acid sequence MMDLTALYLNISLLSTPSFPRSQPHCLSRTCYISLDYLPSQLFQLLFLRHLCWLFSFSLY
PLSLSRPQTSLLSLPRVLP
Secondary structure LLLHHHHHHHHHHHLLLLLLLLLLLLLLLEEEEELLLLHHHHHHHHHHHHHHHHHHHLLL
LLLLLLLLLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHH
HLLLLLLLLLLLLLLLLLL
PiMo oooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTT
Tiiiiiiiiiiiiiiiiii