NONHSAT119563
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT119563 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1181 nt |
Genomic location |
chr7-:24235163..24236456 |
Exon number |
2 |
Exons |
24235163..24235856,24235970..24236456 |
Genome context |
|
Sequence |
000001 CTGTctgatc atactgtact gaaattaatt cttggaatgt ctgtcttccc ctagactata agcctctctg ggcaagatcc 000080
000081 acgtcttact catttttgtg tctgcagttt agttcctggt tcattgtagg ttctcaataa acgtttgtta gaatgagtTG 000160 000161 ATCTCTTGGA TCCAGTGCCC CAGAAAGATA TGTAAGTACT ATTTTTATCC TTTCCCATTG TGTGTCCACC TTCTCTCCAA 000240 000241 TCCTAGATCA CCAAAAGTGA AGCAGAAGTG ATGAGAGTAG CAATTTGTAG TATCAAAACG ACTTCTTATA GTGCACAGAA 000320 000321 AGCCCAGCAC TGTCTCGTAT GGGAgactcg tggttctgcc actgtcttgc tgggtgacct gagataactt cttttctctc 000400 000401 tgggtctgat tcctcaCAGG TCATTTCCAC TGCTGCCCAC TGAGGAGTGC CACTGGAGAT GATCTCACAA CAAAGAGAGG 000480 000481 GGGAGAGgtc cctggccctc ccctttcctc tgtgctctca gcagctgacc ttgtcttttc ctttactgag agtagaggca 000560 000561 CCTCTTACAA ATACTCTGGC CTCTGCCTGG ACTGACTGGG CTAAATTGTC tccgaagatg gccaccaacc attcctccca 000640 000641 cctgtctgca tgcaggctgc tcctcccgtc agaagatgga gactgcttcc ttgcccttca atccaagctg gctcatgact 000720 000721 tgcttcaatg aataggaaat ggcagaagtg atgctctgag gcttctgggc ctagacttta agaggtgttg cccctttcct 000800 000801 ttttccctct tgggatccag cctaccacat agagaagttt gggttgacaa ctaaatgtga gagagagaca gacagagaga 000880 000881 agagggagag ctgattcagc tagaccttag tcattccagc catcctagct gaagcactag catgtgaaag aagccacctt 000960 000961 ctaacctatc aatcagagcc cccaatttta ctgacctcag tcaacaccat gtggaacaga actaccccag ggagcccaac 001040 001041 caacccatac aatcatgaga aattaaaaac tgatgttgta gcctcctgag ttttaaggta gtttgttaca caaaaatact 001120 001121 ggaattttga cccaccttca cctccaatgc caacctagta aacctggata tatctttcaa a |
Predicted Small Protein
Name | NONHSAT119563_smProtein_458:730 |
Length | 91 |
Molecular weight | 9960.3885 |
Aromaticity | 0.0555555555556 |
Instability index | 62.4644444444 |
Isoelectric point | 6.24078369141 |
Runs | 15 |
Runs residual | 0.0268077601411 |
Runs probability | 0.0303479950539 |
Amino acid sequence | MISQQREGERSLALPFPLCSQQLTLSFPLLRVEAPLTNTLASAWTDWAKLSPKMATNHSS HLSACRLLLPSEDGDCFLALQSKLAHDLLQ |
Secondary structure | LLLHHHLLLLLLLLLLLLLLLLEELLLLLEEELLLHHHHHHHHHHHHHHHLHHHHLLLLH HHHHHHHHLLLLLLHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |