NONHSAT119563

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT119563

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1181 nt

Genomic location

chr7-:24235163..24236456

Exon number

2

Exons

24235163..24235856,24235970..24236456

Genome context

Sequence
000001 CTGTctgatc atactgtact gaaattaatt cttggaatgt ctgtcttccc ctagactata agcctctctg ggcaagatcc 000080
000081 acgtcttact catttttgtg tctgcagttt agttcctggt tcattgtagg ttctcaataa acgtttgtta gaatgagtTG 000160
000161 ATCTCTTGGA TCCAGTGCCC CAGAAAGATA TGTAAGTACT ATTTTTATCC TTTCCCATTG TGTGTCCACC TTCTCTCCAA 000240
000241 TCCTAGATCA CCAAAAGTGA AGCAGAAGTG ATGAGAGTAG CAATTTGTAG TATCAAAACG ACTTCTTATA GTGCACAGAA 000320
000321 AGCCCAGCAC TGTCTCGTAT GGGAgactcg tggttctgcc actgtcttgc tgggtgacct gagataactt cttttctctc 000400
000401 tgggtctgat tcctcaCAGG TCATTTCCAC TGCTGCCCAC TGAGGAGTGC CACTGGAGAT GATCTCACAA CAAAGAGAGG 000480
000481 GGGAGAGgtc cctggccctc ccctttcctc tgtgctctca gcagctgacc ttgtcttttc ctttactgag agtagaggca 000560
000561 CCTCTTACAA ATACTCTGGC CTCTGCCTGG ACTGACTGGG CTAAATTGTC tccgaagatg gccaccaacc attcctccca 000640
000641 cctgtctgca tgcaggctgc tcctcccgtc agaagatgga gactgcttcc ttgcccttca atccaagctg gctcatgact 000720
000721 tgcttcaatg aataggaaat ggcagaagtg atgctctgag gcttctgggc ctagacttta agaggtgttg cccctttcct 000800
000801 ttttccctct tgggatccag cctaccacat agagaagttt gggttgacaa ctaaatgtga gagagagaca gacagagaga 000880
000881 agagggagag ctgattcagc tagaccttag tcattccagc catcctagct gaagcactag catgtgaaag aagccacctt 000960
000961 ctaacctatc aatcagagcc cccaatttta ctgacctcag tcaacaccat gtggaacaga actaccccag ggagcccaac 001040
001041 caacccatac aatcatgaga aattaaaaac tgatgttgta gcctcctgag ttttaaggta gtttgttaca caaaaatact 001120
001121 ggaattttga cccaccttca cctccaatgc caacctagta aacctggata tatctttcaa a
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Predicted Small Protein

Name NONHSAT119563_smProtein_458:730
Length 91
Molecular weight 9960.3885
Aromaticity 0.0555555555556
Instability index 62.4644444444
Isoelectric point 6.24078369141
Runs 15
Runs residual 0.0268077601411
Runs probability 0.0303479950539
Amino acid sequence MISQQREGERSLALPFPLCSQQLTLSFPLLRVEAPLTNTLASAWTDWAKLSPKMATNHSS
HLSACRLLLPSEDGDCFLALQSKLAHDLLQ
Secondary structure LLLHHHLLLLLLLLLLLLLLLLEELLLLLEEELLLHHHHHHHHHHHHHHHLHHHHLLLLH
HHHHHHHHLLLLLLHHHHHHHHHHHHHHHL
PRMN -
PiMo -