NONHSAT119873
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT119873 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1213 nt |
Genomic location |
chr7-:30555925..30602441 |
Exon number |
6 |
Exons |
30555925..30556128,30563983..30564102,30590252..30590397,30601082..30601422,30601442..30601744,30602358..30602441 |
Genome context |
|
Sequence |
000001 AGAAGGTACT TGCTTCTCTT TCTCCTGCCA AAGCATGACC TTATAATTGT AAGTTTCCGG AGGCCTCCCC AGCCATGCGG 000080
000081 AACTTTTTCC TAAAATTCCC TTTTCCACTG GTGTGTGGTG CAAGATGAGG CACATTTTCC ATGGATGGTG AACAGAGGGA 000160 000161 GGAGCCTTTT GATCACAACC AGGTCACCCC ACTTCTAAGC CACTGTGCCT CCAGCCCCAC AAGACTAAGG AGAGAGAGCG 000240 000241 CAGCGTGGTG GAGAGTGAGC TGTGCTGGGA CCATTGTTTC CGTAACCTCG TTTTCTGTGT CCAGCTGACA CACCTTCAAA 000320 000321 GTGGCATCAG GTCCTAAACT GTAGCTTGCA ATGTGCCTGT TTCCAGAAAC CAAGGTGAAA GTGCTTTAGA GTCCCTTCCC 000400 000401 AGCTTTTTTC TGGAAATGCA TGTTTCTCTG AACTCTGAGT CCCAAGAAAA ATCACTTGAG ACACCAAGAA AATGGGGGAA 000480 000481 GTGCTAAAAT TGTGTGGGAA TTCAAGCTTA ACAATAAACA TCAAGACATT TTTGATAAAA ATGAATCCAC TGACATCGGG 000560 000561 GAGGAGCAAG AGAACAGCAC GCTGACACTG GGTCAGAGGC TAAGACCGAC ATTTCTGGGA ACCACTCCCG GAAGGGCACA 000640 000641 GAGGAGACGC TTTCAGCCTC TCATCAGCCA GCCTGGCCTG TAGCTGCTGC ACGTTATGAG TGTGTTCCTG GCATGACTGC 000720 000721 TTCTAACAAA GAAATGCTGA GGCAGTGTCA CGCTGGTGTC TGTCCTCCTT ACAGAATGCC TGAACAGTTC CATTGACTCA 000800 000801 AAGTGAAGAT CAAAAGAACC AAATGACAGC AATAGCCAAG TGTAATCATC AGTAACCCTG TGTTCTATCC ACAGTTAAAA 000880 000881 GAATATTGGC AGAGAAACAG CCTTGGTGTT CCAGCAGGAG TGAAGAGGAA CAGGAAAACG AGTGGCAGTA GCCCTGAAAC 000960 000961 AGCCACTTCT GGTGGTTGCC ACTCACCTGA GGATGTGGGG TCTTGCCATT TGCCCAGGCT GGTGTCAAAC TCCTCAAGTA 001040 001041 ATCCTTCTGC CTCGGCCTCC TAAAGTGCCG GGATTATAGG CCTGAGCCAC TACACACAGC CCGGAGTTTT TAAAAAATAC 001120 001121 TCAATTAAAA TGCTTCATTT AAGTGTATGT CTCTAAGAAA ATTTAATAAT TGATTAAATA TTGTTGAATA GACTGAAAAA 001200 001201 AAAAAAAAAA AAA |
Predicted Small Protein
Name | NONHSAT119873_smProtein_140:307 |
Length | 56 |
Molecular weight | 6107.6972 |
Aromaticity | 0.0727272727273 |
Instability index | 60.8509090909 |
Isoelectric point | 6.01177978516 |
Runs | 8 |
Runs residual | 0.00606060606061 |
Runs probability | 0.0452989754461 |
Amino acid sequence | MDGEQREEPFDHNQVTPLLSHCASSPTRLRRESAAWWRVSCAGTIVSVTSFSVSS |
Secondary structure | LLLLLLLLLLLLLLLLLLLEELLLLLLHHHHHHHHEEEEELLLEEEEEEEEEEEL |
PRMN | - |
PiMo | - |