NONHSAT119881
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT119881 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
985 nt |
Genomic location |
chr7-:30564000..30601739 |
Exon number |
4 |
Exons |
30564000..30564102,30590252..30590397,30590934..30591011,30601082..30601739 |
Genome context |
|
Sequence |
000001 CTAAAATTCC CTTTTCCACT GGTGTGTGGT GCAAGATGAG GCACATTTTC CATGGATGGT GAACAGAGGG AGGAGCCTTT 000080
000081 TGATCACAAC CAGGTCACCC CACTTCTAAG CCACTGTGCC TCCAGCCCCA CAAGACTAAG GAGAGAGAGC GCAGCGTGGT 000160 000161 GGAGAGTGAG CTGTGCTGGG ACCATTGTTT CCGTAACCTC GTTTTCTGTG TCCAGCTGAC ACACCTTCAA AGTGGCATCA 000240 000241 GGTCCTAAAC TGTAGCTTGC AATGTGCCTG TTTCCAGAAA CCAAGGTGAA AGTGCTTTTA GACagtgttc ccatgcaaga 000320 000321 gtcccttccc agcttttttc tggaaatgca tgtttctctg aactctgagt cccaagaaaa atcacttgag acaccaagaa 000400 000401 aatgggggaa gtgctaaaat tgtgtgggaa ttcaagctta acaataaaca tcaagacatt tttgataaaa atgaatccac 000480 000481 tgacatcggg gaggagcaag agaacagcac gctgacactg ggtcagaggc taagaccgac atttctggga accactcccg 000560 000561 gaagggcaca gaggagacgc tttcagcctc tcatcagcca gcctggcctg tagctgctgc acgttatgag tgtgttcctg 000640 000641 gcatgactgc ttctaacaGG ACCAGATCTG AACAGTCTGG AGAGAGGAGC TGTGGTGGCA GCAGACAGAT CTCTGCTTCA 000720 000721 GGGGCCAGGT GTCTAGAAGA AATGCTGAGG CAGTGTCACG CTGGTGTCTG TCCTCCTTAC AGAATGCCTG AACAGTTCCA 000800 000801 TTGACTCAAA GTGAAGATCA AAAGAACCAA ATGACAGCAA TAGCCAAGTG TAATCATCAG TAACCCTGTG TTCTATCCAC 000880 000881 AGTTAAAAGA ATATTGGCAG AGAAACAGCC TTGGTGTTCC AGCAGGAGTG AAGAGGAACA GGAAAACGAG TGGCAGTAGC 000960 000961 CCTGAAACAG CCACTTCTGG TGGTT |
Predicted Small Protein
Name | NONHSAT119881_smProtein_401:514 |
Length | 38 |
Molecular weight | 4079.8557 |
Aromaticity | 0.027027027027 |
Instability index | 45.3540540541 |
Isoelectric point | 11.0751342773 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0428495722613 |
Amino acid sequence | MGEVLKLCGNSSLTINIKTFLIKMNPLTSGRSKRTAR |
Secondary structure | LLLEELLLLLLLEEEEHHHHEEEELLLLLLLLLLLLL |
PRMN | - |
PiMo | - |