NONHSAT119900
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT119900 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1188 nt |
Genomic location |
chr7-:30601070..30603859 |
Exon number |
2 |
Exons |
30601070..30601744,30603347..30603859 |
Genome context |
|
Sequence |
000001 TCAGCCACTA AATGGTGCTG GGACCTCGCA GTTTGGTGGG AAGGAGGAAG CTTACTCAAG CAAGGAATAT GAGACAGGCA 000080
000081 AAAACCCACG CATAAGCCAA AAGCCCCTCC AAAGCGAGGT GTTGTTCCAG GCTGACAAGT GTCCAGCAGG GTGGACTTCA 000160 000161 GACTCCCtgt taggaactga attgtgtccc ccaaaaagag aaagtcaccc cagggtatga cctaattcag gaaaggtcat 000240 000241 tgcagatgca tttaattaaa tgaagatgag ctcatgctgg agtagggtgg actctgaacc cagtgggaca agcgtcctta 000320 000321 ttaagaagag ggaaatctgg acacacacag agcagagacc gccgtgtgaa gatggaggca gagatcggag agatgctgcc 000400 000401 acacgccaca aatgcctggg gctcccagaa actacacgga gcctccccca gcggcttcag caggagcatg gctcggccaa 000480 000481 cactttgatc ttggtcttcc agcctccaga acgTTTTCCT AAAATTCCCT TTTCCACTGG TGTGTGGTGC AAGATGAGGC 000560 000561 ACATTTTCCA TGGATGGTGA ACAGAGGGAG GAGCCTTTTG ATCACAACCA GGTCACCCCA CTTCTAAGCC ACTGTGCCTC 000640 000641 CAGCCCCACA AGACTAAGGA GAGAGAGCGC AGCGTGGTGG AGAGTGAGCT GTGCTGGGAC CATTGTTTCC GTAACCTCGT 000720 000721 TTTCTGTGTC CAGCTGACAC ACCTTCAAAG TGGCATCAGG TCCTAAACTG TAGCTTGCAA TGTGCCTGTT TCCAGAAACC 000800 000801 AAGGTGAAAG TGCTTTTAGA Cagtgttccc atgcaagagt cccttcccag cttttttctg gaaatgcatg tttctctgaa 000880 000881 ctctgagtcc caagaaaaat cacttgagac accaagaaaa tgggggaagt gctaaaattg tgtgggaatt caagcttaac 000960 000961 aataaacatc aagacatttt tgataaaaat gaatccactg acatcgggga ggagcaagag aacagcacgc tgacactggg 001040 001041 tcagaggcta agaccgacat ttctgggaac cactcccgga agggcacaga ggagacgctt tcagcctctc atcagccagc 001120 001121 ctggcctgta gctgctgcac gttatgagtg tgttcctggc atgactgctt ctaacagtga gttttctg |
Predicted Small Protein
Name | NONHSAT119900_smProtein_569:736 |
Length | 56 |
Molecular weight | 6107.6972 |
Aromaticity | 0.0727272727273 |
Instability index | 60.8509090909 |
Isoelectric point | 6.01177978516 |
Runs | 8 |
Runs residual | 0.00606060606061 |
Runs probability | 0.0452989754461 |
Amino acid sequence | MDGEQREEPFDHNQVTPLLSHCASSPTRLRRESAAWWRVSCAGTIVSVTSFSVSS |
Secondary structure | LLLLLLLLLLLLLLLLLLLEELLLLLLHHHHHHHHEEEEELLLEEEEEEEEEEEL |
PRMN | - |
PiMo | - |