NONHSAT119935
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT119935 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
543 nt |
Genomic location |
chr7+:31016044..31019146 |
Exon number |
2 |
Exons |
31016044..31016173,31018734..31019146 |
Genome context |
|
Sequence |
000001 GCGTCTCTCC AAGTCGACAC TTTTCCTGAT CCCACTCTTT GGAATTCACT ACATCATCTT CAACTTCCTG CCAGACAATG 000080
000081 CTGGCCTGGG CATCCGCCTC CCCCTGGAGC TGGGACTGGG TTCCTTCCAG GTGAGGACTG AGATCTCACG GAAGTGGCAT 000160 000161 GGCCATGACC CTGAGCTTCT GCCAGCCTGG AGGACCCGTG CTAAGTGGAC CACGCCTTCC CGCTCGGCGG CAAAGGTGCT 000240 000241 GACATCTATG TGCTAGGCTG CCTCATCACG CCACTGGAGT CCACACTTGA ATTTGGGCAG CTACCACGGG TCTGCCATGC 000320 000321 TCTGGAGGAG CAAGGGGGCC ACATCCCCAC CCCAGCTGTT ACCCAGCCCG GGGCAGGTGC AGCCCTTCCT CCCTGTCTCT 000400 000401 GCATCTGACT CTCTTTTGAG GTCCCTGTAT GTCTACCTCT GACTTCTGTG GTCCCTCTGT GTCTGCTCTC ATCCATTCCT 000480 000481 CTTACTGGGG CCTGGGGCTC TAGCCCAAGG CTCAGAGGAG CCAATAAACC TGTAAATGAA TAG |
Predicted Small Protein
Name | NONHSAT119935_smProtein_158:241 |
Length | 28 |
Molecular weight | 2930.5009 |
Aromaticity | 0.037037037037 |
Instability index | 69.0 |
Isoelectric point | 11.5263061523 |
Runs | 5 |
Runs residual | 0.0214707461084 |
Runs probability | 0.0319731496203 |
Amino acid sequence | MAMTLSFCQPGGPVLSGPRLPARRQRC |
Secondary structure | LEEEEELLLLLLLLLLLLLLHHHLLLL |
PRMN | - |
PiMo | - |