NONHSAT119949
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT119949 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
575 nt |
Genomic location |
chr7-:31420784..31427425 |
Exon number |
4 |
Exons |
31420784..31421021,31421510..31421714,31422950..31423043,31427388..31427425 |
Genome context |
|
Sequence |
000001 AGGAGTTTGA GACCAGCCTC GCCAACATGG TGAAACCCAC TGGGTGTGGT GCTTTTGGGA GGTAGATTTT CATTAATAGT 000080
000081 CTAAATTCTT TCAGAATATT AGGATTTAAA TCCTTTGAAA ATATTAAAGC ATTTCATTTT CATTATCTCC CCTTTTCATT 000160 000161 AAATATCTAG CATGTTCATT AATGTTCACT GCTGTATAGT ATTTCATTAA TGAATACACT ACCATTTATT TACTCACTTT 000240 000241 CTTATTCATG GATATTTTAC CTCTTTCATA GCCAAAGTAT GTCCTTTTTA GACATGTCTT CCATGTACAT ATATAAGAGT 000320 000321 TTCTCCAGGG TATATGTGGT CTTATTTGAA TTTTCCTGAT AGTTGAAGAG ATTGAGCATC TTCATGTTTT TCTTTACTTT 000400 000401 TTAGTTTAGT TTTCTTTATT CTATTTCTCT ATTTTAAAAT TTCTTCTTAT TGATTTGTTG ATACCATATA TTTACATATA 000480 000481 TCTGGGTGCT AATTCTGTAT TGATTATACA AGCTGGAAAT ATCTTCTCGA GGCCGTGGGT TGTCTTCTCA CAGTTTTGTT 000560 000561 TTGTTTTTTA ACTCT |
Predicted Small Protein
Name | NONHSAT119949_smProtein_209:358 |
Length | 50 |
Molecular weight | 6004.9187 |
Aromaticity | 0.285714285714 |
Instability index | 64.5655102041 |
Isoelectric point | 6.50347900391 |
Runs | 11 |
Runs residual | 0.0624379481522 |
Runs probability | 0.0256780845016 |
Amino acid sequence | MNTLPFIYSLSYSWIFYLFHSQSMSFLDMSSMYIYKSFSRVYVVLFEFS |
Secondary structure | LLLLLLEEEELHHHHHHHHHHLLLLHHHHHHEEHHHHLEEEEEEEEEEL |
PRMN | LLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLL |
PiMo | oooooooTTTTTTTTTTTTTTTTTTiiiiTTTTTTTTTTTTTTTTTToo |