NONHSAT120026
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT120026 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
650 nt |
Genomic location |
chr7+:33423366..33430260 |
Exon number |
3 |
Exons |
33423366..33423450,33427604..33427756,33429849..33430260 |
Genome context |
|
Sequence |
000001 ACAGGGAGTC AAAGATTTTG CATGTTCTTT TTCGGGATCT ATACCCCTTC AAGAATATTT TGAGTTGATT GATCATCATT 000080
000081 TTGAGCTACG GATAAATGGT GAAAAATTAG AAGAACTCTT ATCTGAGAGA GCTGTACAAT TTCGGGCCAT TCAACGCCGG 000160 000161 CTACTAGCAA GATTCAAAGA TAAAACTCCT GCCCCTCTTC AACACCTGGA CACCTTGTTA GATGGAACCT ACAAGCAGAC 000240 000241 ACAATGGTGG AAGGGCATTT AAAGGAACTT GAAGAGGATG CTTGATTTAA TGCTTTCCAG ATTTTCTATA TAGTAAGACT 000320 000321 TCGTCTTTTA TACATTTAAA GTGCAGAGGT TTTTATTTTT TTCTGCTTAG CCTCAAGGTT GAGGTTTTCC ATGATTTGTA 000400 000401 ATATTACAGA CAAGACGATC AAAACCATGG CTTTTCACTT GAATGTATAT TGTTAAGTCC CATTCCTTTT AGATTAATGA 000480 000481 AAAGAATGAA TAAACATTTG AAGGAAAAAT ATGAGTACTA TAAGGATTTT GACTTAATTT TTATGTACCT TGCCATTCAA 000560 000561 TTTTATTATA TGTATATATT TGTAATAAAT GAGGGTGAGG TGTTGATTGT TCAATAAGTT TCATGAGCAT AATAAAGTCT 000640 000641 ATTTTAATTC |
Predicted Small Protein
Name | NONHSAT120026_smProtein_476:616 |
Length | 47 |
Molecular weight | 5882.9284 |
Aromaticity | 0.239130434783 |
Instability index | 46.7523913043 |
Isoelectric point | 6.53363037109 |
Runs | 8 |
Runs residual | 0.0125517598344 |
Runs probability | 0.0425057410353 |
Amino acid sequence | MKRMNKHLKEKYEYYKDFDLIFMYLAIQFYYMYIFVINEGEVLIVQ |
Secondary structure | LHHHHHHHHHHHHHHHLLLHHHHHHHHHHHHHEEEEELLLEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooo |