NONHSAT120250
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT120250 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
500 nt |
Genomic location |
chr7+:40314110..40427757 |
Exon number |
3 |
Exons |
40314110..40314255,40356359..40356454,40427500..40427757 |
Genome context |
|
Sequence |
000001 AGAATGGAGA TCCAGTTCGC CCAGGAGTAG CTATGACTGA TCTTGCCACT GGCCTGTATG CATATGGAGC TATTATGGCT 000080
000081 GGATTGATAC AAAAATACAA AACTGGGAAA GGACTGTTCA TTGATTGTAA CCTACTGTCA TCCCAGGTGG CGTGTTTGTC 000160 000161 TCACATAGCT GCAAATTATC TTATTGGTCA AAAGGAAGCA AAACGTTGGG GTACAGCTCA TGGCAGTATC GTTCCTTACC 000240 000241 AGatgaggaa gagagtttgt tacttccctg aggaaacaca gcctgtaagc ggatgagttg gaatcggatg caagtttgGA 000320 000321 AGGAAGTATC CTCTCCCCAA ATGTGGGGCA GAGAGACGCT TGGGCTGACC TAATTGTTAA AGCCTCAGTC AGTGTTATGC 000400 000401 TGAATTTGTC GCTTACATGT CTGCACATTA CTTTCAATTG AAAGTAGAAA AATGAAATAG AGATCTAATA AACATTACCA 000480 000481 CAATGTTAAG ACTGAAAAAA |
Predicted Small Protein
Name | NONHSAT120250_smProtein_32:295 |
Length | 88 |
Molecular weight | 9545.011 |
Aromaticity | 0.103448275862 |
Instability index | 45.3482758621 |
Isoelectric point | 9.09820556641 |
Runs | 10 |
Runs residual | 0.0233169129721 |
Runs probability | 0.0392156862746 |
Amino acid sequence | MTDLATGLYAYGAIMAGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWG TAHGSIVPYQMRKRVCYFPEETQPVSG |
Secondary structure | LLHHHHHHHHHHHHHHHHHHHHHLLLLEEEELLLHHHHHHHHHHHHHHHHHHHHHHHHHL LLLLLLLHHHHHEEEEELLLLLLLLLL |
PRMN | - |
PiMo | - |