NONHSAT120302

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT120302

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

1498 nt

Genomic location

chr7-:43648097..43769083

Exon number

4

Exons

43648097..43649240,43679048..43679280,43705257..43705321,43769028..43769083

Genome context

Sequence
000001 CAAGCCTGGA AGAACTCGTC ATGCTCTTTG TAGCGTGGTG CTTCTGTTGC TCACAGaggt gcctgcttcc ccttctgcca 000080
000081 tgattggaag tttcctgagg cctccccagc catgtggaac tGTGGCACCT TGACGAGGTC TTTTTAGAGC TCAAGGATGG 000160
000161 TCAGCAGATT CCTGTGTTCA AGCTCAGTGG GGAAAACGGT GATGAAGTGA AAAAGGAGTA GAGACGACCC AGAAGACCCA 000240
000241 GCTTGCTTCT AGTCCATCCT TCCCTCATCT CTACCATATG GCCACTGGGG TGGTGGCCCA TCTCAGTGAC AGACACTCCT 000320
000321 GCAACCCAGT TTTCCAGCCA CCAGTGGGAT GATGTTGCAC CTGGACTTGA TATGAAAGTA ACCATCAGAA AATCAACAGA 000400
000401 GATCTTAAAC TTGCCTACCA CAGACACCTG CAGGAATATA CTAAGAATCA TCAtagtgga cctttattgt ctcctgagca 000480
000481 cccattcttt gttctttcag aaacacaact ggttttgaga atccatccct tcttcactca gtccacgtaa aggttaggat 000560
000561 ggTAGAAAGT GTTATACCTC TTCCTCCAGA GTTGGAGCCT ATGACACTGA TGACACTGGC ATGGAAAGCC AAAGCCCTAC 000640
000641 ACCAACCAGC ACACTTACTG GTTCCAAATT GATCTACGCT GGTGTAATCA GAGTGAATCT CAGAACTTTG GACAGAGCTG 000720
000721 TGAGCAGAGA CTGACTTTCC TGCTGTCTCC AGGTAGCTGC AAGGCTGAAC AGCAGCACCT ACTTTATTAC CATCTTACTG 000800
000801 TCATTCAaag aaggcagagc tgaatgctgg agaaaaactg agtactagca acagtttttg aaccctgaat actgtcataa 000880
000881 ctgaagctag aattatccct ggacttgttt gccactaaaa tttccttgtt ttgcttaccc tggtttcagc tggcaccctg 000960
000961 atcacttgaa aGGAACATAA CTGATATACT GTCCTTTGTT TTTCTTTCCT TCCTCTTCTC CGCCTTTGAT GATTTTAAAT 001040
001041 TAGAAATCTA CCTGCCTCTA ATCTCTTTAA TTTTCTCATT TATTTACTGC TGCCTATTTT CCAAAACACT GCTTCTCGAA 001120
001121 TATTCCTGGC TCAAAAATCA TCTATGTCTT CATGACATAT GAAACCCCTA GAATCCAGCC TTTCCCCAGC TTTTAATATC 001200
001201 TCCTAATTGA TTTCTCAATT CCAGTGAAAT GATTCCATTT ATTTTTTTCC CAAACACATC ACAAATATTC CTAACTCTTG 001280
001281 TGAGCAATTT TCTCTCATTC TTCTCAACTT ATCTAAATCC TAACTTTTCA AAAGATCTAG CTCAAGTTCT GTCTTATCAT 001360
001361 ATTTTGAGTT CCTTTCTTTG GCATTGTATT ATTTTGTATC TTTCCATGTA CACATGTGTG CATTATCTCC CTGATAAAAC 001440
001441 TAACTGGCTA GAGGATAGGA GTAAAGACTC AATTCTAATA TCCTTGTTAC CTAATAAT
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Predicted Small Protein

Name NONHSAT120302_smProtein_371:517
Length 49
Molecular weight 5737.7613
Aromaticity 0.104166666667
Instability index 40.8083333333
Isoelectric point 9.30096435547
Runs 9
Runs residual 0.0219298245614
Runs probability 0.0338966417399
Amino acid sequence MKVTIRKSTEILNLPTTDTCRNILRIIIVDLYCLLSTHSLFFQKHNWF
Secondary structure LEEEEELLLEELLLLLLHHHHHHHHHHHHHHHHHHHHLLHHHHHLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL
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