NONHSAT120344

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT120344

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2169 nt

Genomic location

chr7+:44096392..44101313

Exon number

9

Exons

44096392..44096502,44097381..44097458,44097572..44097591,44097728..44097879,44098031..44098582,44098953..44099048,44099142..44099257,44099647..44099752,44100376..44101313

Genome context

Sequence
000001 GATGTGGAGC CTGAGTGCAT CATGGAGAAG GTGGCCAAGG CTTCAGGTGC CAACTACAGC TTTCACAAGG AGAGTGGCCG 000080
000081 CTTCCAGGAC GTGGGACCCC AGGCCCCAGT GGGCTCTGTG TACCAGAAGA CCAATGCCGT GTCTGAGATT AAAAGGGTTG 000160
000161 GTAAAGACAG CTTCTGGGCC AAAGCAGAGa tggtcacact gaggctcggA AGGAGGAGGA GAACCGTCGG CTGGAGGAAA 000240
000241 AGCGGCGGGC CGAGGAGGCA CAGCGGCAGC TGGAGCAGGA GCGCCGGGAG CGTGAGCTGC GTGAGGCTGC ACGCCGGGAG 000320
000321 CAGCGCTATC AGGAGCAGGG TGGCGAGGCC AGCCCCCAGA GGACGTGGGA GCAGCAGCAA GAAGTGGTTT CAAGGAACCG 000400
000401 AAATGAGCAG GTAAGATGGG GGTGCTCTAC TTGTTTGGAC CTGTCCTGGC CACACGCAGA AGTCCCTGAT CTCGGATTGA 000480
000481 GGGCCCAGCC CAGACCTGGG CAGAGGCTGC CCTGCAGTCA GCTGGGGCAG GTTGGAATCT GGGCACCTCA AGAGGTGGCA 000560
000561 GTAGAGAGGA AAGCCAAAGG CGGAAGCGTC GGGCTTGGAC CACACCTGGT CCTGGGGGAG GCCCTGGGAG CCCCTTGGCT 000640
000641 TCTGTGTTTT ACTTCCTTTT TTAACGTTAC TTTTTATTTT TAAATGACTT CTCTCCTGAG AACATGTTTT GCCTCCTGGC 000720
000721 CCCACACTCA CCTTTGAGGG GCTACTGGGC CGACAGCTGG AGGGGCTGTG ATCTGGGGAG AGGTGGTGAA GGTTTTGCCC 000800
000801 ACTGCAGGGG TCAACATGTG CTTCCCTCCA GGAGTCTGCC GTGCACCCGA GGGAGATTTT CAAGCAGAAG GAGAGGGCCA 000880
000881 TGTCCACCAC CTCCATCTCC AGTCCTCAGC CTGGCAAGCT GAGGAGCCCC TTCCTGCAGA AGCAGCTCAC CCAACCAGAG 000960
000961 ACCCACTTTG GCAGAGAGCC AGCTGCTGCC ATCTCAAGGC CCAGGGCAGA TCTCCCTGCT GAGGAGCCGG CGCCCAGCAC 001040
001041 TCCTCCATGT CTGGTGCAGG CAGAAGAGGA GGCTGTGTAT GAGGAACCTC CAGAGCAGGA GACCTTCTAC GAGCAGCCCC 001120
001121 CACTGGTGCA GCAGCAAGGT GCTGGCTCTG AGCACATTGA CCACCACATT CAGGGCCAGG GGCTCAGTGG GCAAGGGCTC 001200
001201 TGTGCCCGTG CCCTGTACGA CTACCAGGCA GCCGACGACA CAGAGATCTC CTTTGACCCC GAGAACCTCA TCACGGGCAT 001280
001281 CGAGGTGATC GACGAAGGCT GGTGGCGTGG CTATGGGCCG GATGGCCATT TTGGCATGTT CCCTGCCAAC TACGTGGAGC 001360
001361 TCATTGAGTG AGGCTGAGGG CACATCTTGC CCTTCCCCTC TCAGACATGG CTTCCTTATT GCTGGAAGAG GAGGCCTGGG 001440
001441 AGTTGACATT CAGCACTCTT CCAGGAATAG GACCCCCAGT GAGGATGAGG CCTCAGGGCT CCCTCCGGCT TGGCAGACTC 001520
001521 AGCCTGTCAC CCCAAATGCA GCAATGGCCT GGTGATTCCC ACACATCCTT CCTGCATCCC CCGACCCTCC CAGACAGCTT 001600
001601 GGCTCTTGCC CCTGACAGGA TACTGAGCCA AGCCCTGCCT GTGGCCAAGC CCTGAGTGGC CACTGCCAAG CTGCGGGGAA 001680
001681 GGGTCCTGAG CAGGGGCATC TGGGAGGCTC TGGCTGCCTT CTGCATTTAT TTGCCTTTTT TCTTTTTCTC TTGCTTCTAA 001760
001761 GGGGTGGTGG CCACCACTGT TTAGAATGAC CCTTGGGAAC AGTGAACGTA GAGAATTGTT TTTAGCAGAG TTTGTGACCA 001840
001841 AAGTCAGAGT GGATCATGGT GGTTTGGCAG CAGGGAATTT GTCTTGTTGG AGCCTGCTCT GTGCTCCCCA CTCCATTTCT 001920
001921 CTGTCCCTCT GCCTGGGCTA TGGGAAGTGG GGATGCAGAT GGCCAAGCTC CCACCCTGGG TATTCAAAAA CGGCAGACAC 002000
002001 AACATGTTCC TCCACGCGGC TCACTCGATG CCTGCAGGCC CCAGTGTGTG CCTCAACTGA TTCTGACTTC AGGAAAAGTA 002080
002081 ACACAGAGTG GCCTTGGCCT GTTGTCTTCC CCTATTTTCT GTCCCAGCTC ATCCGTGTCT CTGAAGAACA AATATGCTTT 002160
002161 TGGACCACG
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Predicted Small Protein

Name NONHSAT120344_smProtein_1406:1654
Length 83
Molecular weight 8951.2731
Aromaticity 0.0487804878049
Instability index 58.3036585366
Isoelectric point 6.01947021484
Runs 9
Runs residual 0.0261456023651
Runs probability 0.0438575830733
Amino acid sequence MASLLLEEEAWELTFSTLPGIGPPVRMRPQGSLRLGRLSLSPQMQQWPGDSHTSFLHPPT
LPDSLALAPDRILSQALPVAKP
Secondary structure LLLHHHHHHHHHHHHHLLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLLLLLLLLLLL
LLLHHHLLLLHHHHHLLLLLLL
PRMN -
PiMo -