NONHSAT120433
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT120433 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
549 nt |
Genomic location |
chr7+:45111937..45113161 |
Exon number |
2 |
Exons |
45111937..45112382,45113059..45113161 |
Genome context |
|
Sequence |
000001 cttcctaatc tacaagtgaa gacaggggtg atatatgcct gggttaaagg agacaaagcc ccagtaaccc tgcctggcac 000080
000081 atgagtgata cctcaaAGAC AGCTTTTGCT GGCTCTGGCC ATGGGTGAAT GTGTACTTCA GCCCAGCGTG CAGCAGGATT 000160 000161 TGCATTTGCC AGGATCCCCA GGAGGGGTGT ATGTGGGCTC AAGTCTGGGA AGCCCTGCCC TGAGGCACAC AGCACATTCC 000240 000241 AGAGTGCGGG CAGCTTGATG AAGGACAGCA GGGTCCCTGA AGACCAGGGC TGCCGCTGTC TCCTGTAAAT ACAGCAGTGG 000320 000321 GCTGGACTCA AAATGCCTCC CCACTATGTC CCTGAAAGTC ATCTTAGTTT TCTGCATCTT CCTTACAGAT GACTCTTCTA 000400 000401 CAAAAGTGGA CATTAAGGAG ACCTACGAGG TGGAAGCCAG CACTTTCTGC TTCCCTGAAT CTGTGGATGT GGGTGGTGCA 000480 000481 TCACCCCACA GCAAGACCAT CAGTGAGAGC GAGCTGAGCG CCAGCGCCAC TGAGCTGCTG CAGGACTAC |
Predicted Small Protein
Name | NONHSAT120433_smProtein_128:307 |
Length | 60 |
Molecular weight | 6286.2395 |
Aromaticity | 0.0508474576271 |
Instability index | 50.0033898305 |
Isoelectric point | 9.34625244141 |
Runs | 9 |
Runs residual | 0.0080858342404 |
Runs probability | 0.0367622524486 |
Amino acid sequence | MCTSAQRAAGFAFARIPRRGVCGLKSGKPCPEAHSTFQSAGSLMKDSRVPEDQGCRCLL |
Secondary structure | LLLHHHHHHHHHHHLLLLLLEEELLLLLLLLLLLLLLLLHHHHLLLLLLLLLLLEEELL |
PRMN | - |
PiMo | - |