NONHSAT120479
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT120479 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1199 nt |
Genomic location |
chr7+:45980028..45998250 |
Exon number |
2 |
Exons |
45980028..45981147,45998172..45998250 |
Genome context |
|
Sequence |
000001 tggccacccg ggccagcagc agcaacctgc tcaggtcccc ttccatggtg tggaagcttt gttctttcgc tgttcacaat 000080
000081 gaatcttgct gctgctcact ctttgggtcc gcactagctt tatgagctgt aacgctcact gcgaaggtct gtggcttcac 000160 000161 tcctgaagtc agcaagacca cgaacccacc ggaaggagga aacaactccg gaagcaccac gtttaagagc tgtaacactc 000240 000241 actgcgaaag tctgcagctt cactcctgaa gtcagcaaga ccacaaaccc accggaagga agaaattcca gacacatcta 000320 000321 aacattggaa ggaacaaact ccagacacac tatctttaag aactgtaaca ctcaccgcga gggtctgtgg cttcatgctt 000400 000401 gaagtcagcc ggaccaagaa cccaccggaa agaaccaatt cctgacacaA TCGTATGTAA AATTTTACTT CCTGATGTGG 000480 000481 GAGTTCATGA AAATGAATTT AAACCTAATT TTAATTATGC TTATATTCTT ACCCCCTCCT GTTGCCATTC CGTCCTATAC 000560 000561 ATGACCCCAA ACCAACAAAC ACTTGAATTG TTTATTTTTA ATTACACCAC GAGGCTACAT TTTTATTGTT TTACAAGGCA 000640 000641 TAGGTAAAAA GCAAGGAGTT GAAGGCAAGT GGACTGGGGC AGGGAGGTGG AACTGGAGCG CACTGCGGTC AGAACCCTGG 000720 000721 GTTGGATGGA GGTTTGGTTT CTGTCTCTGC CAGAAGCCGT CTCTCTTAAC CGTGGACAGA tcttgttcct gaatggacgc 000800 000801 tttcagtatt tctttctgaa gtctgatatt tgctatagat tttatttttt tctgtggctg tagataccct ttatctggtt 000880 000881 aataaaatta ttatctatta ctattttgct aagttaaaga aaagcatgac tgttgaaatg tatcacatac ttttctctgc 000960 000961 acctacaaag atgaccaaat gaactcacca ttggtttatt aatgttgtga atgacattga ttttgctcct aatgtttaac 001040 001041 caatctgtgt tcctgATCAT GATCAAACCT GGTCTTTAtt cttcttcccc ttttcgtttt cttgctcctg ctgcttctca 001120 001121 gcttaatgga gcgacccaca tggtgagaaa ctgaggcctc ttggcaacag ctatgtcact aaaccaactt ggaagtggg |
Predicted Small Protein
Name | NONHSAT120479_smProtein_1010:1153 |
Length | 48 |
Molecular weight | 5241.2666 |
Aromaticity | 0.106382978723 |
Instability index | 49.1638297872 |
Isoelectric point | 11.0001831055 |
Runs | 6 |
Runs residual | 0.0386170212766 |
Runs probability | 0.051698757581 |
Amino acid sequence | MTLILLLMFNQSVFLIMIKPGLYSSSPFRFLAPAASQLNGATHMVRN |
Secondary structure | LHHHHHHHHHHHHHHEEELLLLLLLLHHHHHHHHHHHHLLLLLLLLL |
PRMN | LLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | i?????????????????????????????????????????????? |