NONHSAT120587
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT120587 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
945 nt |
Genomic location |
chr7+:51322404..51325030 |
Exon number |
2 |
Exons |
51322404..51322487,51324170..51325030 |
Genome context |
|
Sequence |
000001 CCAAGATGCA CTGATGTCTA TGAACACCAG CTTTTTCATA AGCTCCACAG CCACCATCTG ACCTCATGAA GGGGACTGCA 000080
000081 TAAGAACACA ACGAAGAGGC AATGACCACA CCCACGTGGG CCTGGGCTTT CACTCAGGAG TTCGGATCTC ATGGAAAAAC 000160 000161 ACCGTGGAAG ATGCCCTGGG GCAGCACCAC TACCCGGATC CACATCCACT CAATCGCCCT AGTAGGGCCT CCAGAGCACT 000240 000241 CCTGCAAGCG TCACGTGGTT TCACAGATCC CAGGCAGagg cagggcaagt gttactacca ccaccagtga ggaaatgaaa 000320 000321 gcccagagaa gctgtgagac ttgatgaagg tcaccaactg gctaaatgAT GATAGGTGCT CTAATGAGAA GTTTTATTAC 000400 000401 CTCACTATAT TGTTTTACTC AAAAATATTT CCTGTCTGAC AGCTGCTTCC CGGATTTACT GCTTAAAGTG AGTAATTCCA 000480 000481 CTCTTCTTAG ACATGGAATT TTACATATAG CACCAGAGCA GAGCTAAGGA TTCCTTTACT AATTTTCCTT ACTCatttat 000560 000561 tatattatat aaaatataCA CGAGACTTGA ACAGGGAATG AGGAAGCCCA GAAGAGCAGA AACTAAACCA GTCCAGTGGA 000640 000641 AGTGTCACAT ATATTGTTGC ATAGCCTGCA TTCCAgagta gcaagatgag gctctgagct tcctagcggt catggcaaag 000720 000721 atgagatgca aagccagatt caaagctccc atgtctcaag ataaaagaag acagatccag agaaccagtg ccctgcagcc 000800 000801 ctcatgctgg agacatggtg tgcaatagtg aattacgtcc ccaacaacgt gccaaaaaac aaaaatacaa agatggtttt 000880 000881 ccaacagttg cttctcccct caataaaacc tacatcacac caagactcca ctcagtagaa gtcat |
Predicted Small Protein
Name | NONHSAT120587_smProtein_101:343 |
Length | 81 |
Molecular weight | 8920.0177 |
Aromaticity | 0.075 |
Instability index | 48.22375 |
Isoelectric point | 9.69097900391 |
Runs | 12 |
Runs residual | 0.0111842105263 |
Runs probability | 0.0473782606136 |
Amino acid sequence | MTTPTWAWAFTQEFGSHGKTPWKMPWGSTTTRIHIHSIALVGPPEHSCKRHVVSQIPGRG RASVTTTTSEEMKAQRSCET |
Secondary structure | LLLLHHHHHHHHHHLLLLLLLLLLLLLLLEEEEEEEEEEEELLLLLLEEEEEEEELLLLL EEEEEELLLHHHEEEEELLL |
PRMN | - |
PiMo | - |