NONHSAT120592
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT120592 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2377 nt |
Genomic location |
chr7+:51449981..51452357 |
Exon number |
1 |
Exons |
51449981..51452357 |
Genome context |
|
Sequence |
000001 ATGTACTTGG CCCACAGGCC CCTGATGTCT GCGTCCAGCA AGGCCTCTGG TGGTGTCAGC ATGTTTGTGT GGAGGAATGT 000080
000081 GGAACCTTGC TCTGTGGCTG TGTTCTCCTG GTACTCTGTC CCCTTCCTGA CCCCTCCCTG CAGCCGCGTG AGGCCCAGCA 000160 000161 ACCTGCCAGT CACTCAGTGG CCTCCAACCA GAGCAAAGAA CCTGCCAAGT CGGCAGCTGT TGCTCACGAG TGTCCACCAG 000240 000241 GTGGGACAGG GAGTGCTGAC CCTGGGCGGC CCCCTGCAGC CACCTGCCCT GAAAGCCCAG GGCCCGGAAC CCCACACACT 000320 000321 TTGGGGGTGG TGGAACCTGG TAAAAGCCCA CCTCTCACCA TGGAGGAGGA GCCCTGGGCC CTCAGGGGAG TCCCTGCTGG 000400 000401 ACAGTGAGAC AGAGAATGAC CACGATGATG CTTTCCTCTC CGTCATGTCT CCTGACACCC AGTTGCCTCT ACGATTCAGA 000480 000481 TGATGTCAGG CCCAGTCCCT CAGTGCCCTG TGCAAGGAAC AGGACTCATC TTCTGAGAAG GATGGACGCA GCCCCAACAA 000560 000561 ATGGGACAAG GACCACATCT GGTGGCCCAT GAGTGGCGGT CACGATCTTC AGCAAGCGGC ACCAGGCCCT GGCAGGGCGC 000640 000641 ACCAGGGTCA CCCCTACCAG GATAACTGGA CCATCAGCCA GATCCTGAGC GAGCGGTGGT ACACCCTGGG GCCCAATGAG 000720 000721 ATGCAGAAGT ACCACGACCT GGCCTTCCAG GTGAAGGTGG CCCACTTGCA ACAAGGACCG AAAGAAGTCC AGCTCAGAGG 000800 000801 CCAAGCCCAC AAGCCAGGGG CTAGCAGGAG TGTACAACGG ATCGTGGGAG TGGAGCATAT CAGAGACGGG CACTGCCACT 000880 000881 ACCCCTGGGG TGTCCTCTGA ACTCCTGTCA GTTGCAGCCC AGACACTCCT GAGCTCGGAT ACCAAGGAGC AGCTTCTGTG 000960 000961 GGGGCAGAAC AGCTGCACAC AGTCAGGGAA CCTGGCTCAG CCTGGCCCAA GCCTTCTCCC ACAAGGGGGT ACACACAGCC 001040 001041 TGGATGGCAG GGAAATAGAC CGTCAGGCAC TACAGGAACT GACACAGGTG GTGTCTGGCA CTGCATCATA CTCTGGCCCA 001120 001121 AAGCCTTCTA CTCAGTATGG AGCTCCAGGC CACTTTGCAG CCCCTGGTGA GGGAGGTGAC CAGTGGGCAG CCCTGCTGCT 001200 001201 GCCCACCTGA GCTGCTCATT CCCAGCACAT GGCCGGTGAG GACATAGCGA GTGACGAGGA GCACATGGTC ATCCATGAGG 001280 001281 AGGAGGGGGT GATGGTGTCA TTGCTGATGA CGGCTTTAGC ACCACTGACA CTGATCTCAA GTTCAAGGAG TGGGTGACCG 001360 001361 ACTGAGAGTG GGGACAACTC TGGGGAGGAG CCAGAAAGCA ACAAGGGCTT TGGTGGGAAG GTATCTGCAC CTGTCATTCC 001440 001441 TTCCTCCTTT ACTCCTACTG CCCCTTGCTG GATCCTGAGT CCCCCGAGTC CCCCGATCCA CCTGCAGTTT TTGGCAAAGT 001520 001521 CTATGGTCCC ACCCCGTCCT CCTCCTACAC ATACTCGGAT GCTTCCTCCT CAACCTTGGC ACCCACCTCC TTCTTACTGG 001600 001601 GCCCAGGAGC CTTCAAAGCC CAGGAGTCTG GTCAGGGCAG CAGAGCAGGC CCCCTACGGC CCCTACCCCT GGGGGTGGGG 001680 001681 GCCCAGGGAT GCCTTCCAAG GCGATCTGTT TCCTCCCAAT GGATCCTGCC ACCTTCTGGT GCAAGAGATC TGAAAGTGTG 001760 001761 GGCGACCTGG AGCTACCAGG CCCCTCAGTC ATCGTGGTCC CTCCCAACAC TAAGGCTTTC CTAGGCAGGA GCTGGGCTGA 001840 001841 GCCACCCGGG GGGCAGAGCC TGAAGAGGAG AAACTGACTG GGCTTTGGGG GTCGGGGCAG AGGGAACCCC ACGGACATGG 001920 001921 ATCCCGCACT GGAGGACCCC ACCACGCTCA AATGCAAGAT GAGAAGATGC TCCAGCTGCA GCCCAAAGCC CAACACCCCC 002000 002001 AAGTGTGCCA TGTGTGATGG GAACAGCTTC CCCTTTGCCT GTACAGGTGA AGCCGAGGAC GGTCTCAGGG AACTGGAGAC 002080 002081 CGAGAAGGCG CTGTCCTCTT CACTGCATGC GCCCTGGACT AGTGCCGGCC CTGATCATGC AGCTCTTCCA GGCCCACTGC 002160 002161 TTCTTCCTGT CCACTAGGCC ACAGCCGCCC TCCAGGCCCA CTATACACAC ATCTTCCCCT CCAAGGTTTG TTCTGCCCCT 002240 002241 GCCCTGATTC CCAGCCCTGC AGGGGTCCTG ACCCCACCTC ACCTGGCTCA GACTCTGAAG CTGCCCTACC ACTGCCTCTG 002320 002321 CCCGAGAGTC ACATGAGGCT GAGAGTAGGG GCAGGGGCAG CAGTGGTGCC AGTTGGG |
Predicted Small Protein
Name | NONHSAT120592_smProtein_1916:2176 |
Length | 87 |
Molecular weight | 9137.3545 |
Aromaticity | 0.0348837209302 |
Instability index | 62.1895348837 |
Isoelectric point | 5.46270751953 |
Runs | 9 |
Runs residual | 0.0349704963554 |
Runs probability | 0.0393530785687 |
Amino acid sequence | MDPALEDPTTLKCKMRRCSSCSPKPNTPKCAMCDGNSFPFACTGEAEDGLRELETEKALS SSLHAPWTSAGPDHAALPGPLLLPVH |
Secondary structure | LLLLLLLLLHHHLLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLHHHLLLHHHHHHHHHL LLLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |