NONHSAT120694
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT120694 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2818 nt |
Genomic location |
chr7+:55804472..55807289 |
Exon number |
1 |
Exons |
55804472..55807289 |
Genome context |
|
Sequence |
000001 ATGTACTTGG CCCACAGGCC CCTGATGTCT GCGTCCAGCG AGGCGTCCGG TGGCGTCAGC ATGTTTGTGT GGAGGAATGT 000080
000081 GGAACCTTGT TCTGTGGCTG TGTTCTCCTG GTACTCTGTC CCCTTCCTGA CCCCTCCCTG CAGCCGCGTG AGGCCCAGCA 000160 000161 ACCTGCCAGT CACTCAGTGG CCTCCAACCA GAGCAAAGAA CCTGCCAAGT TGGCAGCTGT TGCTCACGAG TGTCCACCAG 000240 000241 GTGGGACAGG GAGTGCTGAC CCTGGGCGGC CCCCTGAAGC CACCTGCCCT GAAAGCCCAG GGCCCAGAAC CCCACACACT 000320 000321 TTGGGGGTGG TGGAACCTGG TAAAAGCCCA CCTCCTACCA TGGAGGAGGA GCCCTGGGCC CCTCAGGGGA GTCCCTGCTG 000400 000401 GACAGTGAGA CAGAGAATGA CCACAATGTT GCTTTCCTCT CTGTCATGTC TCCTGACACC CAGTTGCCTC CACCACTCAG 000480 000481 ATGATGTCAG GCCCAGTCCC TCAGTGCACT GCGCAAGGAA CAGGACTCAT CTTCTGAGAA GGATGGACGC AGCCCCAACA 000560 000561 AATGGGACAA GGACCATATC CGGTGGCCCA TGAGTGGCGT TCATGATCTT CAGCAAGCGG CACTAGGCCC TGGCAGGGCG 000640 000641 CACCAGGGTC ACCCCAACCA GGATAACCGG ACCGTCAGCC AGATCCTGAG CGAGCGGTGG TACACCCTGG GGCCCAATGA 000720 000721 GATGCAGAAG TACCAGACCT GGCCTTCCAG GTGAAGGTGG CCCACTTGCA ACAAGGACCG AAAGAAGTCC AGCTCAGAGG 000800 000801 CCAAGCCCAC AAGCCAGGGG CTAGCAGGAG TGTACAAGGG CTCATGGGAG CAGAGCATAT CAGAGACGGG CACTGCCACT 000880 000881 GCCCCTGGGG TGTCCTCTGA ACGCCTGTCA GTTGTGGCCC AGACATTCCA GAGCTCGGAT ACCAAGGAGC AGCTTCTGTG 000960 000961 GGGCAGGACG GCTGCACACA GTCAGGGAAC CTGGCTCAGC CTGGCCCAAG CCTTCTCCCA CAGCGGGGTA CTCAGCCTGG 001040 001041 ACGGCAGGGA AATAGACCGT CAGGCACTAC AGGAACTGAC ACAGGTGGTG TCTGGCACTG CATCATACTC TGGCCCAAAG 001120 001121 CCTTCTACTC AGCATGGAGC TCCAGGCCAC TTTGCAGCCC CTGGTGAGGG AGGTGACCAG TGGGCAGCCC TGCTGCTGCC 001200 001201 CACCTGAGCT GCTCATTCCC AGCACATGGC CAGTGAGGAC ACAGCGAGTG ACGAGGAGCC CATGGTCATC CATGAGGAGG 001280 001281 AGGGGGTGAT GATGTCATTG CTGATGACGG CTTTAGCACC ACTGACACTG ATCTCAAGTT CAAGGAGTGG GTGACCGACT 001360 001361 GAGAGTGGGG ACGACTCTGG GGAGGAGCCA GAGGGCAACA AGGGCTTTGG TGGGAAGGTA TTGGCACCTG TCATTCCTTC 001440 001441 TTCCTTTACT CCTGCCACCC CTTGCTCGAT CCTGAGCCCC CAGGGTCCCC CGATCCACCT GCAGTTTTTG GCAAAGTCTA 001520 001521 TGGTCCCACC CCGTCCTCCT CCTACACACT CCTATGCTTC CTCCTCAACC TTGGCACCCA CCTCCTTACT GGGCCCAGGA 001600 001601 GCCTTCAAAG CCCAGGAATC TGGTCAGGGC AGCAGAGCGG GCCCCCTATG GCCCCTACCC CTGGGGATGG GGGCCCAGGG 001680 001681 ATGCCTTCCA AGGCGACCTG TTTCCTCCCA ATGGATCCTG CCACCTTCTG GTGCAAGAGA CCTGAAAGTG TGGGCGACCT 001760 001761 GGAGCTACCA GGCCCCTCAG TCATCACGGT CCCTCCCAAC ACTAAGGCTT TCCTAGGCAG GAGCTGGGCT GAGCCACCCG 001840 001841 GGGGGCAGAG CCTGAAGAGG AGAAACTGAC TGGGCTTTGG GGGTCGGGGC AGAGGGAACC CCACGGACAT GGATCCCGCA 001920 001921 CTGGAGGACC CCACCACGCT CAAATGCAAG ATGAGAAGAT GCTCCAGCTG CAGCCCAAAG CCCAACACCC CCAAGTGTGC 002000 002001 CATGTGTGAT GGGGACAGCT TCCCCTTTGC CTGTACAGGT GGGAGAAGCC GAGGACGGGC TCAGGGAACC GGAGACCGAG 002080 002081 AAGGCGGTGT CCTCTTCACT GCACGTGCCC TGGACCAGTG CCGGCCCTGA TCATGCAGCT CTTCCAGGCC CACTGCTTCT 002160 002161 TCCTGTCCAC TAGGCCACAG CCGCCCTCCA GGCCCACTAT GCACACATCC TCCCCTCCAA GGTTTCTTCT GCCCCTGCCC 002240 002241 TGACTCCCAG CCCTGTGGGG GTCCTGACCC CACCTCACCT GGCTAGACTC TGACGCTGCC CTGGCTGCCC CACCACTGCC 002320 002321 TCTGCCCAAG AGTCACGTGA GGCTGAGAGT AGGGGCAGGG GCAGCAGTGG TGCCAGTTGG GGGGCGGTCC AGTGGGAGGA 002400 002401 GCCTCAGCCT CGGGGGCTGC TCCGTGGGAC TGATGACTGC ATGATCTTCT GGGCACCTCA CGGATCTTCA ACTGCAGGTG 002480 002481 AAACGGATGC TGGTGGTGGG TGCAGGGCCG CTGGGAGCCG CTGCATGGGT CCCAGAGGCT GGACTGCGGC AGGTGCCAAC 002560 002561 TGAAGCTGCT GGGGAAGCAT GAGCAGGATG TTCTGCACAC AAACCTTGGA GAAGACGTGT GCATAGCGGG TCCACTGCTG 002640 002641 CTGCccctgc cctgactccc agccctgtct gaccccacct caccctgctc aggctctggc gcaaccctgg ctgccctgcc 002720 002721 actgcctctg cccCAGAGGT GGGACCTTGA CAGCCTGGCT GGAAGGGGAC ACCCTAGCCC TGCTTCAACA CCTGGGTCCC 002800 002801 TCCATAACTA CCACAGGC |
Predicted Small Protein
Name | NONHSAT120694_smProtein_359:592 |
Length | 78 |
Molecular weight | 8540.678 |
Aromaticity | 0.025974025974 |
Instability index | 73.8168831169 |
Isoelectric point | 8.54364013672 |
Runs | 7 |
Runs residual | 0.0451722190853 |
Runs probability | 0.0292603527898 |
Amino acid sequence | MEEEPWAPQGSPCWTVRQRMTTMLLSSLSCLLTPSCLHHSDDVRPSPSVHCARNRTHLLR RMDAAPTNGTRTISGGP |
Secondary structure | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLHHHH HHLLLLLLLLEEELLLL |
PRMN | - |
PiMo | - |