NONHSAT120819
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT120819 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1375 nt |
Genomic location |
chr7+:57260401..57261775 |
Exon number |
1 |
Exons |
57260401..57261775 |
Genome context |
|
Sequence |
000001 AATGCTAAAA ATTATTATTA TTCCAATAAT TACACTGCTA CCAATAAAAT GACTCTCTAA AAACTCTATA ATCTGAATCA 000080
000081 ATATGACTAT TCACAGCCTA ATCATCAGCT TCATTGCCCT GTTATTTTTT AATCAATTTA ATGACAATCT ATTCAACTTC 000160 000161 TCATTAACTT TCTCTTCTGA TCTGCTGACA TCACCCCTTC TAATCTTAAC AGCCTGACTA CTACCTCTTA GAATTATAGC 000240 000241 AAGCCAGTAC CACCTCTCCA ATGAGTCACC CCCATGGAAA AAGCTCTATT ATTTCCATAT TGGTTTCCCT ACAATTTTCT 000320 000321 TTAATTATGG AATTGACAGC CACAGAACTA ATTATATTTT ATATTCTCTT TGAAGCTACA CTTATCCCTA CCTTAATTAT 000400 000401 GATCACCCCC TGAGGTAACC AACCAGAACG CCTCAATGCA AGCTCGTATT TCTTATCTTA TACACTAGTG GGATCTCTTC 000480 000481 CCCCTGCTTA CTATACTTAT TTATATACTC AAAATACCTC GGTTCACTGA ACACGATAAT AATAATATTT AACACCCAAG 000560 000561 AACTATTAAT TTCCTGATCC AATAACCTTG TATGATTAAC ATGTATTATG GGTTTTATAG TAAAAATACC CCTACACGGA 000640 000641 CTTCACCTAT GACTTCCTAA AGCCCATGTA CAAGCCCCTA TTGCAGGCTC AATAGTACTT GCAGCAGTTC TCCTAAAACC 000720 000721 AGGCAGCTAT GGCATAATAC GGGTTACCCT TATCCTCAGC CCCCTGACAG AATATACACC TTACCCCTTC CTCATGTTAT 000800 000801 CCTTATGAGG GATAGTTATG ATAAGCTCTA TTTGTCTACG ACAAACTGAT CTAGAATCAC TTATTGCATA TTACTCTGTA 000880 000881 AGTCATACAG CACTTGTTAT TAAGGCTATC CTCATTCAAA CTCCCTGAAG CTTTACCGGT GCAATTACCC TCATAATTGC 000960 000961 CCATGGACTT ACTTCAACCT TACTATTCTG CCTAGCAAAT TCAAACTATG AGTGAATCCA TAGCCGAATC ATATTACTCT 001040 001041 TTTAAGGTCT TCAAACACTA CTCCCACTAA CAGCCTTTTG ATGACTTATA GCAAACCTTA CTAACCTTGC CTTACCCCCC 001120 001121 ACCACTAATC TAATAGGAGA ACTCTTTGTA ATGGTGGCTT CATTCTCCTG ATCAAACATC ATCATTATGC TTATAGGACT 001200 001201 AATATATTAA TCACAGCCCT TTATTCCCTA TACATGCTTA TCACAACACA AGGAACACTT ACATATTACA TTAACAGTAT 001280 001281 TAAACCTTCC TCCACACAAG AAAAGATGCT AATACTTACA CACCTTGCAC CTATTCTCCT ATTATCCCTA AACCCTAAGA 001360 001361 TTATTATAGG TTTTA |
Predicted Small Protein
Name | NONHSAT120819_smProtein_260:412 |
Length | 51 |
Molecular weight | 5588.7238 |
Aromaticity | 0.08 |
Instability index | 40.6042 |
Isoelectric point | 5.31585693359 |
Runs | 5 |
Runs residual | 0.0646783625731 |
Runs probability | 0.0382264617558 |
Amino acid sequence | MSHPHGKSSIISILVSLQFSLIMELTATELIIFYILFEATLIPTLIMITP |
Secondary structure | LLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLEEEELL |
PRMN | LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTToooooooooooo |