NONHSAT120883
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT120883 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
943 nt |
Genomic location |
chr7-:57895015..57895957 |
Exon number |
1 |
Exons |
57895015..57895957 |
Genome context |
|
Sequence |
000001 TGCCGCCCTG GGGCGCCACT CTCACTGGGT TCTTGGCGGT GCTCACCCTA CTCCACCTGC TCAGCCCAGG CTCCTGCGCC 000080
000081 CCTGAAGTCA CGCCATGGGA GCGAGGAGCT TGCCGAGGCC CTAGACAAGG ACAATGAGGA GGGGGTGCAC GTGGAGTCCC 000160 000161 CGCGGATAGG CTGGACGCTG GGCAGGAGCC TTTGCGGGGG TGCACAGCCT CCTCTGGAAG CCCTGGTCGC TGCCCGGTGC 000240 000241 CTGCTGCGCC CTGCGAGCTC CGCGGCGGTG GAGCCAGGCC TGGGCTGCCT GCTCTCGGCC CTGCCTGCGG ACCCTCTGCC 000320 000321 TTTTGTCTTG CCCGTGGGGC CCGGGGCCTC AGCTGGCCCG GGATTCCTGA AGTTAGCTGA TGATGGGCTG GCCTCTGGGA 000400 000401 CTGGGTCGTG GGCCTTGTGC ACTGGCCGCC ACGTCACCAG CGCCTACCCG GGGTGCTGCT GGAGATGCGG GATGCCCGGG 000480 000481 CTCGGGCTCT GCTGGGTCCC CTGGCGTTGC GAACCCCGTC ACCTTCCATC GCGGCCACCA TGCTGCCCGC TGGTCAGCCC 000560 000561 TGGTCTGGAG CCTTCCTGGG ACCCCTCCGG CCCCAAGGAG GCATCACTCA CAGCCGCTTG CGACACCGGG ACCGCCTGAA 000640 000641 CCTCCGCCAG GGCTGCGCCG CGCAAGTGGC TCCAGCCAGC CAGCCCTGGC CCATGAGCAG GACTTTCCGC TCCTCGAGAT 000720 000721 GATCACCCTC GGCAGGGATA CACGGCTATG GAGGAGGCAG CGGATACCTT CCAAAGTTTG TGGACACTCT TCTGCCACAC 000800 000801 CAAAAGTTTC ACCATCAGCT GCGATGCCGA CTGGGGCGTA GAGACCACTC CGGGATGTGG ACCAGGCAGT GCCTTTGCTG 000880 000881 GGCATCCGCC GTGCTGACCA CCCCAAGTGC AGACCCGCAC TTCGTGTAAC TCCTACTGCA CGT |
Predicted Small Protein
Name | NONHSAT120883_smProtein_464:721 |
Length | 86 |
Molecular weight | 9252.6318 |
Aromaticity | 0.0470588235294 |
Instability index | 69.6541176471 |
Isoelectric point | 12.3522338867 |
Runs | 11 |
Runs residual | 0.00713012477718 |
Runs probability | 0.0289299995182 |
Amino acid sequence | MRDARARALLGPLALRTPSPSIAATMLPAGQPWSGAFLGPLRPQGGITHSRLRHRDRLNL RQGCAAQVAPASQPWPMSRTFRSSR |
Secondary structure | LLHHHHHHHLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHLLH HHHLLLEELLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |