NONHSAT120936

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT120936

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2705 nt

Genomic location

chr7-:63228635..63231425

Exon number

2

Exons

63228635..63229571,63229658..63231425

Genome context

Sequence
000001 CCAGCGAGGC CTCCCGTGGC GTCAGCGTGT TCGTGTGGAG GAATGTGGAA CCTCACTCTG TGGCCGTGTT CCCCTGGTAC 000080
000081 TCCGTCCCCT TCCTGACCCC TCCCTGGAGC CACACGAGGC CCAGCAACCT GCCAGTCACT CAGTGGCCTC CAACCAGAGC 000160
000161 AAACAACCTG CCAAGTTGGC AGCTGTTGCT CATGAGCATC CACCAGGTGG GACAGGGAGT GTTGACCCTG GGTGGCCCCC 000240
000241 TGGAGCCACC TGCCCTGAAA GCCCAGGGCC CAGAACCCCA CACACTTTGG GGGTGGTGGA ACCTGGTAAG GGCCCACCTC 000320
000321 CCACCATGGA GGAGGAGCCC TGGGCCCCTC AGAGGAGTCC CTGCTGGACA ATGAGACAGA GAATGACCAC GATGATGCTT 000400
000401 TCCTCTCCGT CATGTCTCCT GACACCCAGT TGCCTCTACC ACTCAGATGA TGTCAGGCCC AGTCCCTCAG TGCCCTGCGC 000480
000481 AAGGAACAGG ACTCATCTTC TGAGAAGGAT GGATGCAGCC CCAACAAATG GGACAAGGAC CACATCCCGT GGCCCATAAG 000560
000561 TGGTGGTCAT GAGCTTCAGC AAGCGGCACC AGGCCCTGGC AGGGCGCACC AGGGTCACCC CAACCAGGAC AACCGGACCG 000640
000641 TCTGCCAGAT CCTGAGCGAG CGGTGGTACA CCCTGGGGCC CAATGAGATG CAGAAGTACC ACGACCTGGC CTTCCAGGTG 000720
000721 AAGGTGGCCC ACTTGCAACA GGGACCGAAA GAAGTACAGC TCAGAGGCCA AGCCCACAAG CCAGGGGCTA GCAGGAGTAT 000800
000801 ACAAGGGCTC CTGGGAGCAG AGTATATCAG AGACGAGCAC TGCCACTGCC CCTGGGGTGT CCTCTGAACT CCTGTCAGTT 000880
000881 GCAGCCCAGA CACTCCAGAG CTCGGATACC AAGGAGCAGC TTCTGTGGGG CAGAACGGCT GCATACAGGG AACCTGGCTC 000960
000961 AGCCTGGCCC AAGCCTTCTC CCACAGGGGT GTACACAGCC TGGACGGCAG GGAAATAGAC CGTCAGGCAC TACAGGAACT 001040
001041 GACAGAAGTG GTGTCTGGCA CTGCATCATA CTCTGGCCCA AAGCCTTCTA CTCAGTATGG AGCTCCAGGC CACTTTGCAG 001120
001121 CCCCTGGTGA GGGAGGTGAC CAGTAGGCAG CCCTGCTGCT GCCCACCTGA GCTGCTCATT CCCAGCACAT GGCCAGTGAC 001200
001201 GACATAGTGA GTGATGAGGA GCACATGGTC ATCCATGAGG AGGAGGGGGT GACAATGTCA TTGCTGATGA CGGCTTTAGC 001280
001281 ACCACTGACA CTGATCTCAA GTTCAAGGAG TGGGTGACCG ACTGAGAGTG GTGACAGCTC TGGGGAGGAG CCAGAGGGCA 001360
001361 ACAAGGGCTT TGGTGGGAAG GTATTTGCAC CTGTCATTCC TTCCTCCTTT ACTCCTGCCG CCCCTTGCTG GATCCTGAGC 001440
001441 CCCCAGGGTC CCCCGATCCA TCTGCAGTTT TTGGCAAAGT CCATGGTCCC ACCCCCTCCT CCTCCTACAC ATACTCGGAT 001520
001521 GCTTCCTCCT CAACCTTGGC ACCCACCTCC TTCTTACTGG GCCCAGGAGC CTTCAAAGCC TAGGAGTCTG GTCAGGGCAG 001600
001601 CAGAGTGGGC CCCCTACGGC CCCAACCCCT GGGGATGGGG GCCCAGGGAT GCCTTCCAAG GTGACCTGTT TCCTCCCAAT 001680
001681 GGATCCTTCC ACCTTCTGGT GCAAGAGACC TGAAAGTGTG GGCGACCTGG AGCTACCAGG CCCCTCAGTC ATCGCAGTCC 001760
001761 CTCCCAACAG AGGGAACCCC ACGGACATGG ATCCCGCACT GGACGACCCC ACCACACCCA AATGCAAGAT GAGAAGATGC 001840
001841 TCCATCTGCA GCCCAAAGCC CAACACCCCC AAGTGTGCCA TGTGTGATGG GGACAGCTTC CCCTTTGCCT GTACAGGTGG 001920
001921 AGAAGCCAAG GACGGGCTCA GGGAACCGGA GACCGAGAAG GCGCTGTCCT CTTCACTGCA CGCGCCCTGG ACCAGTGCCG 002000
002001 GCCCTGATCG TGCAGCTTTT CCAGGCCCAC TGCTTCTTCC TGTCCACTAG GCCACAGCCG CTCTCCAGGC CCACTATGCA 002080
002081 CACATCTTCC CCTCCAAGGT TTGTTCTGCC CCTGCCCTGA CTCCCAGCCC TGAGGGGGTC CTGTCCCCAC CTCACCTGGC 002160
002161 TCAGACTCTG ACGCTGCCCT GGCTGCCCCA CCACTGCCTC TGCCCAAGAG TCACGTGAGG CTGAGAGTAG GGGCAGGGGC 002240
002241 AGCAATGGTG CCAGTTGGGG GGCGGTCCAG TGGGAGGAGG CTCAGCCTCG CGGGCTGCTC CGTGGGACTG ATGACTGCAT 002320
002321 GATCTTCTGG GCACCTCACG GATCTTCAAC TGCAGGTGAA ACGGATGCTG GTGGTGGGTG CAGGGCCGCT GGGAGCCGCT 002400
002401 GCATGGGTCC CAGAGGCTGG ACTGGGGCAG GTGCCAACTG AAGCTGCTGG GGCAGCATGG GCAGGATGCT CTGCACACAA 002480
002481 ACCTTGGAGA AGAAGATGTG TGCATAGTGG GTCCACTGCT GCTGCccctg ccctgactcc cagccctgtc tgaccccacc 002560
002561 tcaccctgct caggctctgg cgcaaccctg gctgccctgc cactgcctct gcccCAGAGC TGGGGCCTCG ACAGCCTGGC 002640
002641 TGGAAGGGGA CACCCCAGCC CTGCCTCAAC ACCTGGGTCC CTCCATAACT ACCACAGGCA GGTGG
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Predicted Small Protein

Name NONHSAT120936_smProtein_1886:2119
Length 78
Molecular weight 8577.0393
Aromaticity 0.0519480519481
Instability index 86.4064935065
Isoelectric point 12.0022583008
Runs 8
Runs residual 0.0321852060982
Runs probability 0.0301625154566
Amino acid sequence MGTASPLPVQVEKPRTGSGNRRPRRRCPLHCTRPGPVPALIVQLFQAHCFFLSTRPQPLS
RPTMHTSSPPRFVLPLP
Secondary structure LLLLLLLLLEEELLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHEEELLLLLLLL
LLLLLLLLLLEEELLLL
PRMN -
PiMo -