NONHSAT121045
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT121045 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1834 nt |
Genomic location |
chr7-:64327248..64330355 |
Exon number |
2 |
Exons |
64327248..64328970,64330245..64330355 |
Genome context |
|
Sequence |
000001 aaaaaggctg cctgcgacaa cccactgtgg gaccctagaa gtctcgacag tacagcctct ttggggcgtc tccgtggttc 000080
000081 atcccgctgg aggaggaggc gtttcgagac tGTGAAGATG CGGGACCCAA ACCACATTTC ACCAGACTGT ATCCTCACCC 000160 000161 CCATCTGACC TTACTGCTGC TCACACTCTC CGTCCCAGAA TGAAATCCCC AGAAGATGGA AGAGTGCCCG CCTCACGACG 000240 000241 TGAAGCACCT ACTCGGCTGG GAACTGAATT GGAGGTGGAT TCAAGGGGCT CTGGGAATGA AACCCCAAAT CAGGAGCTGG 000320 000321 CCGGAAAGGC TGCAGTTTGC ACTCCGACTG TTTCCAACTG TTCCCCGCAC TTTGGAGTCC TCCCACCTGG GCACCGGGCC 000400 000401 ATGGTGTGGA CAGATTGTGT AATGAAGCGA ATGTAAGGAT GGAGTTGGAA GCACCTTCTG TGTCATCAGT CTGCACCTTT 000480 000481 TTTTGCAGGT GAAGGTGCGG GACCCCATCC TTAgggattt tgcggtgtat ccctggggct ccgcttgagg tttcttcagg 000560 000561 ctggttcgcc gctgccctct cctagggtca tgggactatc ccgtggatcc cacagagaag acagactaga gtccatcgct 000640 000641 gacgcacctc cacagaggac tccttttctg ccaagccaca gggactagtc gccaggcaaa ggtggtgttc actgtgatgc 000720 000721 gagccgtggc tcACTGGTGC CCTGAGACTG GCGCATGCCC ATTCGGGAGG CAGGCTCAGG CATCTGATGA TGGCATCTTC 000800 000801 CTGGATTAGG CCCCCACAGA AATTGAGGAA GTTGTTATCA GTCATTTATA CCCTGAAAAT ATTAGTTCAC CAGAGCCCTG 000880 000881 GAGGGGGATG GGTAGAAGCT CATTAAAGTA GGTCTGGATG GTGCACAGAG TGTGAAGAAA ACAGAGAAAC CCAGAAAGTC 000960 000961 TAAGCCTGAA GACAGCTCca atcctaggag atactattat tatgtccatc ttacagagga ggaaactgaa acaaaggaag 001040 001041 agaacttgat caagaccatg ttgccccaca gtggaagagc caagatccaa acccaggtaa cctgcctcat catcagagcc 001120 001121 tggactcata acctcatgct gcagttaagc aggtttgcac tgtggctaga tacacagact ctgtgttcac atctcagctt 001200 001201 ctctgctatt tccatttctg tgactgtagg caagttactt ctctgtgctc agtttcctct ataaagtaag gacagtagca 001280 001281 cctgcctcag gggggtctct taaataagtt aatagatgca acatgtttag aacattgcca tgggctgggc gctgtggctc 001360 001361 atgcctgtaa tctccacaat ttgtgaggcc aaggcgggtg gatcacctga ggtccggagt tcgagaccat cctgaccaac 001440 001441 atggcgaaac cccgtctcta ctgaaaatac aaaaattagc caagtgtggt ggcatgcacc tgtaatccca gctactcagg 001520 001521 aggctgagac aggagaattg cttgaacctg ggaggtggag gttgcagtga gccaaggtca caccattgca ctccagcttg 001600 001601 ggtaacaaga gtgaaactcc atctctagaa aaaaaaaaaa aagaacagtg ccatgtacac agtcaccatc tagtaataat 001680 001681 atcatctatt atGTCTGAAC CCTGGATGGT CGCATATCCT TGAAGAGTTT AAAATTCTGG ACTTTGAAAT GCCAGACTGT 001760 001761 GGGATCCTGG AATCTGTCAG CTTCATGCTA ACCTCTTCCA GCTGCAGAAT TTTATGCTTC TTTGCAGGGT TGGA |
Predicted Small Protein
Name | NONHSAT121045_smProtein_215:421 |
Length | 69 |
Molecular weight | 7932.1558 |
Aromaticity | 0.102941176471 |
Instability index | 57.125 |
Isoelectric point | 7.87908935547 |
Runs | 7 |
Runs residual | 0.037559618442 |
Runs probability | 0.0427864839629 |
Amino acid sequence | MEECPPHDVKHLLGWELNWRWIQGALGMKPQIRSWPERLQFALRLFPTVPRTLESSHLGT GPWCGQIV |
Secondary structure | LLLLLLLLLLLLLLLLLLHHHHHHHHLLLLLLLLLHHHHHHHHHHLLLLLLLLLLLLLLL LLLLLEEL |
PRMN | - |
PiMo | - |