NONHSAT121203

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT121203

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1229 nt

Genomic location

chr7-:65996303..66057363

Exon number

11

Exons

65996303..65996386,65996778..65996858,66006229..66006349,66010588..66010673,66016807..66016836,66019572..66019824,66025566..66025662,66038372..66038537,66049332..66049453,66053499..66053567,66057244..66057363

Genome context

Sequence
000001 GGTGCCGGGA GCGGGGCGAG GAGGAGGGTG GGTATGAGGC GGTAGCGGAC CGCGGAGTCG AGACCTACCC GAACGACGCG 000080
000081 GGCGAGCGGG GCTTTGGACG CCGGTGGAGA CGCAGGCGAG GGCTGCTGTA AAATATTACA GGCATACTTT GGAGATGTTA 000160
000161 TGGGTTTGGT TCCACATCAC TGCAATAAAA TGGAGCCTCG CTCTGTCGCC AAGACTGGAG TTCAGCGGCA CGATCTCGGC 000240
000241 TCACTGCAAG CTCCACCTCC GAGGTTCACG CCATTCTCCT GCCTCAGCCT CCCAAGTAGC TGGGACTACA GACTCCAGCG 000320
000321 GGAGGAAGAA GAGGCCTTTG CCAGCAGTCA GAGCAGCCAA GGGGCCCAAT CCCTCACATT CTCCAAGTTT GAAGGAAAGA 000400
000401 AAACCAACAA GAAGACCCGC AAGGTTACCA CAGTGAAGAA ATCTTCAGTA CGTCTTCCAG GGTCGGATCA AAGAAGGGCT 000480
000481 GGAGTGCAAT GGCGCGATCT CGGCTCACTG CAACCTCCAC CTATTGGGTT CAAGTGATTC TCCTGCCTCA GCCTCCCAAT 000560
000561 AGCTGGGATT ACAGATATTG AAATGGATTC CAGGCGTGTG CCTCGAGACA AGCTGGCCTG CATCACCAAG TGCAGCAAGC 000640
000641 ACATCTTCGA TGCCATCAAG ATCACCTAGA ACGAGCTGGC GTCAGCAGAT GACTTCCTCC CCACCCTCAT CTACATTGTT 000720
000721 TTGAAGGGCA ACCCCCATGC CTTCAGTCTA ATATCCAGTA TATCACGTGC TTCTGCAATC CAAGCCGACT GATGACTGGA 000800
000801 GAGGATGGCT ACTATTTCAC CAATCTGAGA CGGGGGCAGT CTCACTACAT GGCCCAGAGG CTGGGCACTC ACTGCAGCTG 000880
000881 GCTAATGATG ACCATGTGGA CATGCTTTCG GGCCTTCAGG ATCTTCTCCA GCCAGTGGAT GTCGATTCTC AGCAGGCATG 000960
000961 GCCGTGGGTG CACAGAACAG AGAAAGGATG GCCTGGACCA CACACATCAC TGTGTGCAGA TGCTTTCCTA GACACTGCAG 001040
001041 CCAAGGACAC AGAGGCTCAG AGAGAATAAC CTCCATCTCC TGGGTCCCAG CGATTCTCCT GCCTCAGCCT CTTCCTATTT 001120
001121 CACAAGTAGG GAAACTGAAG CCCAGCAAGC CCTACATGAA GAGGCCTCTT TGGTGAGTGG CAGCTCAACC TCTGCTAAAT 001200
001201 GCCTCCAGTG ATGGGGAGTT CACTACCTT
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Predicted Small Protein

Name NONHSAT121203_smProtein_791:1030
Length 80
Molecular weight 9407.711
Aromaticity 0.126582278481
Instability index 58.6759493671
Isoelectric point 9.19927978516
Runs 9
Runs residual 0.0263568579851
Runs probability 0.0583328426465
Amino acid sequence MTGEDGYYFTNLRRGQSHYMAQRLGTHCSWLMMTMWTCFRAFRIFSSQWMSILSRHGRGC
TEQRKDGLDHTHHCVQMLS
Secondary structure LLLLLLEEELLLLLLLHHHHHHHHHLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLL
LLLLLLLLLLLLEEEEELL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiii
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