NONHSAT121203
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT121203 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1229 nt |
Genomic location |
chr7-:65996303..66057363 |
Exon number |
11 |
Exons |
65996303..65996386,65996778..65996858,66006229..66006349,66010588..66010673,66016807..66016836,66019572..66019824,66025566..66025662,66038372..66038537,66049332..66049453,66053499..66053567,66057244..66057363 |
Genome context |
|
Sequence |
000001 GGTGCCGGGA GCGGGGCGAG GAGGAGGGTG GGTATGAGGC GGTAGCGGAC CGCGGAGTCG AGACCTACCC GAACGACGCG 000080
000081 GGCGAGCGGG GCTTTGGACG CCGGTGGAGA CGCAGGCGAG GGCTGCTGTA AAATATTACA GGCATACTTT GGAGATGTTA 000160 000161 TGGGTTTGGT TCCACATCAC TGCAATAAAA TGGAGCCTCG CTCTGTCGCC AAGACTGGAG TTCAGCGGCA CGATCTCGGC 000240 000241 TCACTGCAAG CTCCACCTCC GAGGTTCACG CCATTCTCCT GCCTCAGCCT CCCAAGTAGC TGGGACTACA GACTCCAGCG 000320 000321 GGAGGAAGAA GAGGCCTTTG CCAGCAGTCA GAGCAGCCAA GGGGCCCAAT CCCTCACATT CTCCAAGTTT GAAGGAAAGA 000400 000401 AAACCAACAA GAAGACCCGC AAGGTTACCA CAGTGAAGAA ATCTTCAGTA CGTCTTCCAG GGTCGGATCA AAGAAGGGCT 000480 000481 GGAGTGCAAT GGCGCGATCT CGGCTCACTG CAACCTCCAC CTATTGGGTT CAAGTGATTC TCCTGCCTCA GCCTCCCAAT 000560 000561 AGCTGGGATT ACAGATATTG AAATGGATTC CAGGCGTGTG CCTCGAGACA AGCTGGCCTG CATCACCAAG TGCAGCAAGC 000640 000641 ACATCTTCGA TGCCATCAAG ATCACCTAGA ACGAGCTGGC GTCAGCAGAT GACTTCCTCC CCACCCTCAT CTACATTGTT 000720 000721 TTGAAGGGCA ACCCCCATGC CTTCAGTCTA ATATCCAGTA TATCACGTGC TTCTGCAATC CAAGCCGACT GATGACTGGA 000800 000801 GAGGATGGCT ACTATTTCAC CAATCTGAGA CGGGGGCAGT CTCACTACAT GGCCCAGAGG CTGGGCACTC ACTGCAGCTG 000880 000881 GCTAATGATG ACCATGTGGA CATGCTTTCG GGCCTTCAGG ATCTTCTCCA GCCAGTGGAT GTCGATTCTC AGCAGGCATG 000960 000961 GCCGTGGGTG CACAGAACAG AGAAAGGATG GCCTGGACCA CACACATCAC TGTGTGCAGA TGCTTTCCTA GACACTGCAG 001040 001041 CCAAGGACAC AGAGGCTCAG AGAGAATAAC CTCCATCTCC TGGGTCCCAG CGATTCTCCT GCCTCAGCCT CTTCCTATTT 001120 001121 CACAAGTAGG GAAACTGAAG CCCAGCAAGC CCTACATGAA GAGGCCTCTT TGGTGAGTGG CAGCTCAACC TCTGCTAAAT 001200 001201 GCCTCCAGTG ATGGGGAGTT CACTACCTT |
Predicted Small Protein
Name | NONHSAT121203_smProtein_791:1030 |
Length | 80 |
Molecular weight | 9407.711 |
Aromaticity | 0.126582278481 |
Instability index | 58.6759493671 |
Isoelectric point | 9.19927978516 |
Runs | 9 |
Runs residual | 0.0263568579851 |
Runs probability | 0.0583328426465 |
Amino acid sequence | MTGEDGYYFTNLRRGQSHYMAQRLGTHCSWLMMTMWTCFRAFRIFSSQWMSILSRHGRGC TEQRKDGLDHTHHCVQMLS |
Secondary structure | LLLLLLEEELLLLLLLHHHHHHHHHLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLL LLLLLLLLLLLLEEEEELL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiii iiiiiiiiiiiiiiiiiii |