NONHSAT121206
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT121206 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1655 nt |
Genomic location |
chr7-:66018553..66057363 |
Exon number |
4 |
Exons |
66018553..66019824,66025566..66025662,66038372..66038537,66057244..66057363 |
Genome context |
|
Sequence |
000001 GGTGCCGGGA GCGGGGCGAG GAGGAGGGTG GGTATGAGGC GGTAGCGGAC CGCGGAGTCG AGACCTACCC GAACGACGCG 000080
000081 GGCGAGCGGG GCTTTGGACG CCGGTGGAGA CGCAGGCGAG ACTCCAGCGG GAGGAAGAAG AGGCCTTTGC CAGCAGTCAG 000160 000161 AGCAGCCAAG GGGCCCAATC CCTCACATTC TCCAAGTTTG AAGGAAAGAA AACCAACAAG AAGACCCGCA AGGTTACCAC 000240 000241 AGTGAAGAAA TCTTCAGTAC GTCTTCCAGG GTCGGATCAA AGAAGGGCTG GAGTGCAATG GCGCGATCTC GGCTCACTGC 000320 000321 AACCTCCACC TATTGGGTTC AAGTGATTCT CCTGCCTCAG CCTCCCAATA GCTGGGATTA CAGATATTGA AATGGATTCC 000400 000401 AGGCGTGTGC CTCGAGACAA GCTGGCCTGC ATCACCAAGT GCAGCAAGCA CATCTTCGAT GCCATCAAGA TCACCTAGAA 000480 000481 CGAGCTGGCG TCAGCAGATG ACTTCCTCCC CACCCTCATC TACATTGTTT TGAAGGGCAA CCCCCATGCC TTCAGTCTAA 000560 000561 TATCCAGTAT ATCACGTGCT TCTGCAATCC AAGCCGACTG ATGACTGGAG AGGATGGCTA CTATTTCACC AATCTGGTGA 000640 000641 GTAAGTGAGT TCTTGGCGTT GTGGAGAAGG ACTAGGAAGG TGGTGGTTTT GGGGATGTGA TAGGTCACTC AGGCCCATGA 000720 000721 CAGGTGAATG CTTCTGTGTG AGAAGGCAGC ACGGCTGAGG AAGCTCACTT TGCATCAGGG AGCACAAGGA CCAGGCCGTA 000800 000801 CAGACACTCC GCCTCCCCGC ACTTGATCAG AGATTGTGTT TATCCTACAG AAACAGATGA CATGTGTTGG GCATCACTCC 000880 000881 CCACGGTCCT GGGTAGAAGA GTCCTTCACT TGGCAGGGCT TTTTCAACCA ATGAATAAGG CAAATTATAT ATAAGTTAAT 000960 000961 AATGCCATTT CGAACCGAGA CAGATGGCAG CTAAATGAAG TTTAATTAAA GAATGAGCGC TGGGGCCCTT TTTATTGGGT 001040 001041 ACTGCATCTA CTTCGACCAC AAAAGACGAA GTGACCCCAA CTTCAAGAAC AGGCTTTGAG ATGGAAGAAA GAAACAGAAG 001120 001121 CTTGCCAAGG AGAGAGCTGG GCTTTCCAAG TTACCTGACC TTAAAGATGC TGAAGCTGTT CAGAAGTTCT TCCTTGAAGA 001200 001201 AATACAGCTT GGTGAAGAGT TACTAGCTCA AGGTGAATAT GAGAAGGGCG TAGACCATCT GACAAACGGA ATTGCTGTGT 001280 001281 GTGGACAGCC ACAGCAGTTA CTGCAGGCCT TACAGCAAAC TCTTCCACCA CTAGTGTTCC AGATGCTTTT GACTAAGCTC 001360 001361 CCAACAATTA GAGAATTCTA AGTGCTCAGA GCTTGGCTGA AGATGATGTG GAATGAGAAA CAAATGTTAA CATAATAAAA 001440 001441 TCTCAGTTAA AAATATTTAA AAAATTCTTG GTAGTTGAGC AGCTCTGGGG GAATAAGGGC AAATATCCTT GTTATGAACT 001520 001521 ACACTGAAAT CTACCAAAGT TAATGTTTAC TTTGTGTAGG TCCATTTGTC TATTTTATTT ATTTTTCCCA GTGAAAAGTG 001600 001601 TATTTTGATA GAGAACTTTT CATTTTATAA ATACACTATG AGTTACTGAA AATTC |
Predicted Small Protein
Name | NONHSAT121206_smProtein_1100:1225 |
Length | 42 |
Molecular weight | 4953.8276 |
Aromaticity | 0.121951219512 |
Instability index | 76.7365853659 |
Isoelectric point | 10.4392700195 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0474550180432 |
Amino acid sequence | MEERNRSLPRRELGFPSYLTLKMLKLFRSSSLKKYSLVKSY |
Secondary structure | LLLLLLLLLHHHLLLLHHHHHHHHHHHHHLLLLLLEEEELL |
PRMN | - |
PiMo | - |