NONHSAT121397
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT121397 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
630 nt |
Genomic location |
chr7+:72946587..72947216 |
Exon number |
1 |
Exons |
72946587..72947216 |
Genome context |
|
Sequence |
000001 ggggtttcgc catgtttgcc aggctggtct caaattcctc acctcaggtg atctgcctgc cttgacctcc caaagtgttg 000080
000081 ggattacagg cgtgagccac cacgcccagc TCTATAAACT TTCTATGATC TCAAAGCCTC CAAGATTCTT CTCCAGACCC 000160 000161 TAATGGTATT CCACCTTCAC GACCCCTCAT GGCTCCTACT TCTCCACCTT Ctctgctgca tcagaccata agctccttaa 000240 000241 aggcagtgac catgtgttTA CCAGTTATAC TTTACAAAGA ACCTACCAAG ATTATGTTTG CAACAAATAC AGTTGTCCCT 000320 000321 CAGTATCCAC AAATTCAACT GGTAGTGGAT CAAAAATACC GGATTCAAGA GATGCAGAAc atggcctact gtgggacttg 000400 000401 agcatctgca ggttttggta tccaccaggg tcctggaacc aacccctcca gataccaagg gacaactgTA TTTGTAAAAT 000480 000481 Atttttattt atttattttt ttgagacata gtgttgctct gtcgcccagg ccaggctgga gtgcagtggc aagatctcgg 000560 000561 ctcactgcaa cctccacctc cagggctcaa gctgggatta caggtgtgtg ccaccacacc cagctgattt |
Predicted Small Protein
Name | NONHSAT121397_smProtein_188:400 |
Length | 71 |
Molecular weight | 7901.3123 |
Aromaticity | 0.0714285714286 |
Instability index | 42.2628571429 |
Isoelectric point | 8.68499755859 |
Runs | 13 |
Runs residual | 0.0408769448373 |
Runs probability | 0.0406288641583 |
Amino acid sequence | MAPTSPPSLLHQTISSLKAVTMCLPVILYKEPTKIMFATNTVVPQYPQIQLVVDQKYRIQ EMQNMAYCGT |
Secondary structure | LLLLLLLLHHHHHHHHHHHHHLLLLEEEELLLLEEEEELLEELLLLLEEEEEELLHHHHH HHHHHHHLLL |
PRMN | - |
PiMo | - |