NONHSAT121397

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT121397

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

630 nt

Genomic location

chr7+:72946587..72947216

Exon number

1

Exons

72946587..72947216

Genome context

Sequence
000001 ggggtttcgc catgtttgcc aggctggtct caaattcctc acctcaggtg atctgcctgc cttgacctcc caaagtgttg 000080
000081 ggattacagg cgtgagccac cacgcccagc TCTATAAACT TTCTATGATC TCAAAGCCTC CAAGATTCTT CTCCAGACCC 000160
000161 TAATGGTATT CCACCTTCAC GACCCCTCAT GGCTCCTACT TCTCCACCTT Ctctgctgca tcagaccata agctccttaa 000240
000241 aggcagtgac catgtgttTA CCAGTTATAC TTTACAAAGA ACCTACCAAG ATTATGTTTG CAACAAATAC AGTTGTCCCT 000320
000321 CAGTATCCAC AAATTCAACT GGTAGTGGAT CAAAAATACC GGATTCAAGA GATGCAGAAc atggcctact gtgggacttg 000400
000401 agcatctgca ggttttggta tccaccaggg tcctggaacc aacccctcca gataccaagg gacaactgTA TTTGTAAAAT 000480
000481 Atttttattt atttattttt ttgagacata gtgttgctct gtcgcccagg ccaggctgga gtgcagtggc aagatctcgg 000560
000561 ctcactgcaa cctccacctc cagggctcaa gctgggatta caggtgtgtg ccaccacacc cagctgattt
[back to top]

Predicted Small Protein

Name NONHSAT121397_smProtein_188:400
Length 71
Molecular weight 7901.3123
Aromaticity 0.0714285714286
Instability index 42.2628571429
Isoelectric point 8.68499755859
Runs 13
Runs residual 0.0408769448373
Runs probability 0.0406288641583
Amino acid sequence MAPTSPPSLLHQTISSLKAVTMCLPVILYKEPTKIMFATNTVVPQYPQIQLVVDQKYRIQ
EMQNMAYCGT
Secondary structure LLLLLLLLHHHHHHHHHHHHHLLLLEEEELLLLEEEEELLEELLLLLEEEEEELLHHHHH
HHHHHHHLLL
PRMN -
PiMo -