NONHSAT121604
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT121604 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1224 nt |
Genomic location |
chr7-:76018651..76022807 |
Exon number |
3 |
Exons |
76018651..76019692,76021281..76021358,76022704..76022807 |
Genome context |
|
Sequence |
000001 CGAGGCTCGC CTGAGCGACT GCTTCCACCT GGGCTGGGGC CAGCACAACT GCGGCCACCA CGAGGACGCG GGAGCGCTCT 000080
000081 GCGCAGGTGA GGCTGACAGC GAAGGCCCAG AGGAGCTGGG ACTGCAAGTC CAGCAGGATG GTTCTGAGAC CACGCGGGTG 000160 000161 CCCACTCCTC GGCCCAGGGA CGGGCATCTA CGTCTGGTCA ATGGAGCCCA CCGATGCGAG GGACGTGTAG AGCTCTACCT 000240 000241 AGGGCAACGG TGGGGCACTG TCTGTGATGA TGCTTGGGAC CTGCGGGCAG CCGGTGTCCT GTGCCGCCAG CTGGGCTGTG 000320 000321 GCCAGGCCCT CGCAGCCCCT GGCGAGGCTC ACTTTGGCCC AGGCCGAGGC CCCATTCTCC TGGACAATGT CAAGTGCCGT 000400 000401 GGGGAAGAAA GTGCTCTGCT GCTCTGCTCT CATATCCGCT GGGATGCCCA CAACTGTGAC CACAGCGAGG ATGCCAGTGT 000480 000481 CCTGTGCCAG CCTTCATGAC CCAGCCCGCT CTGCAGACCA CCTCTTCTTC TGGGAGCTGT GACCTCCCTT CCTCCTCCAG 000560 000561 GAAGCCCTCC TCTTGTGATG ACTACAGTTC ACTTTGCCCC TCCTTCCCTT GCCTGGGAGA GAGCCTACCT AGACAGTGCA 000640 000641 GTCCTGCTTG GGGGAGCCTG GCTGTACCCC CGTCCACTTA CTGCGTGACC TCAGCCTGTC ATCGACTGTT GTGAGCCCAA 000720 000721 TTCAGTGAAA GCTCCTGTGG TTTTGCTCAG CCAAAACCAA AACGAGGGGA AGAGGATGAT TCCTAACTCT TCTGTTTGGT 000800 000801 GGGGCTCTTT TTATAGCACC AGACTCTGCC TTCCTTGACC TAGATCCAGG AGGCTCAGGG GCTCTTTAAA TGGGGTATCT 000880 000881 CCTCTTCCCC CAACCCATCT TGGGATCCCC AAGAAGAGGG AAGGCAGGAG GGGCCTACAG CTCCTACCTT GGGCCCTCAG 000960 000961 GGGCTGCAGA GGAACCTGGG TCCCTGTCCT GCCCTGCTCC GCGAGGGCCT GGACTAACTC AGATGGTGCT CGGCTGGACA 001040 001041 AGGGGACTGG GGGAGGGGCC AAAGCAGGGA CAGTGGCCCC TCCCTGCAGC TGGAACCAGC ATCTCTGATT TATGCCGTCT 001120 001121 CCACCACAGA GCCTCCACTT TGCAGGAGTG AAGAACCCTG GGGGCCTGTA GCCACCAGTT CATAGGTGCC AAGTCAATAA 001200 001201 AGCATTGTCC CCCGTCTCTT ATAA |
Predicted Small Protein
Name | NONHSAT121604_smProtein_869:1150 |
Length | 94 |
Molecular weight | 9656.893 |
Aromaticity | 0.0645161290323 |
Instability index | 51.2483870968 |
Isoelectric point | 9.23480224609 |
Runs | 9 |
Runs residual | 0.034149741139 |
Runs probability | 0.0291075389115 |
Amino acid sequence | MGYLLFPQPILGSPRRGKAGGAYSSYLGPSGAAEEPGSLSCPAPRGPGLTQMVLGWTRGL GEGPKQGQWPLPAAGTSISDLCRLHHRASTLQE |
Secondary structure | LEEEELLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLLLLLLLLLLLEEEEELLLLLL LLLLLLLLLLLLLLLLLHHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |