NONHSAT121646
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT121646 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
866 nt |
Genomic location |
chr7-:76941483..76961261 |
Exon number |
9 |
Exons |
76941483..76941519,76942805..76942866,76943687..76943806,76950042..76950136,76950650..76950720,76952964..76953059,76955529..76955590,76959499..76959684,76961125..76961261 |
Genome context |
|
Sequence |
000001 ATTCCATCAA ACGTCTGCAG GATTTGTCTT GTCttttttt tttttttttt ttcttcttAA ATACAAAGAA GACCCAAAGG 000080
000081 GTGGATAAGT GTACGTTCAT TATAAATAAA TGGAAAGGGA AAGAAAAGAT GAGTGAGGTG CTCAGCTTTA AGGGCTACTG 000160 000161 GGAAAAACTG AACTCCAACC TAGAATATGT TAAGTACGCC AAGCCACACT TCCACTATAA CAACAGTGTG GTCAGGAGAG 000240 000241 AGTGGCACAA CCTGATCTCT GAAGAGGTAT GAGTGGGTCA GTGAGAACAA AGCCAGCAGC GAGGCATAGT GGACTGGATC 000320 000321 CAGGGCCAAG ATTAACACCC CTCCTGCAGG AGGAAGACAG CCACCAGCGG CTGCTCATGG GGCTGATGGT GTCTGAGCTA 000400 000401 AAAGACCATT TTTTGAGACA CCTACAGGGT GTAGAAAAGA AGAAAATTGA ACAGATGGTT CTGGACTACA TTTCAAAACT 000480 000481 GCTGGATCTC ATTTGCCACA TCGTAGAAAC CAATTGGAGG AAACATAATC TTCATTCCTG GGTTCTCCAC TTCAATAGTC 000560 000561 GTGGCAGTGC TGCTGAATTT GCAGTTTTTC ACATCATGAC CAGGATTCTG GAAGCTACAA ACAGTTTGTT TTTACCTCTG 000640 000641 CCTCCTGGTT TTCATACTCT GCACACCATC CTCGGGGTCC AGTGTCTCCC TTTGCATAAC CTGCTGCATT GCATTGACAG 000720 000721 TGGAGTGTTG CTTCTCACTG AAACAGCTGT CATAAGGCTC ATGAAAGATC TGGATAATAC AGAGAAAAAT GAAAAACTGA 000800 000801 AATTCAGTAT CATTGTGCGG CTTCCTCCGC TTATTGGGCA GAAGATTTGT AGACTTTGGG ATCATC |
Predicted Small Protein
Name | NONHSAT121646_smProtein_128:271 |
Length | 48 |
Molecular weight | 5772.4209 |
Aromaticity | 0.170212765957 |
Instability index | 52.4744680851 |
Isoelectric point | 6.82122802734 |
Runs | 10 |
Runs residual | 0.0464893617021 |
Runs probability | 0.0231937820173 |
Amino acid sequence | MSEVLSFKGYWEKLNSNLEYVKYAKPHFHYNNSVVRREWHNLISEEV |
Secondary structure | LLEEELLLLHHHHHHHHHHHHHHHLLLEELLLLLEEHHHHHHHHLLL |
PRMN | - |
PiMo | - |