NONHSAT121700
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT121700 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
983 nt |
Genomic location |
chr7+:78982726..78983708 |
Exon number |
1 |
Exons |
78982726..78983708 |
Genome context |
|
Sequence |
000001 CAACAACTCC CAGAGCTTCC AGACCCAAGA TACATTTTGG AACCCCAGGA CAATCCTGAA CTGGCACCCG CCCTGGTGTG 000080
000081 TGCCCTTTGC TGCTGCTGCT TTGGAATCAT CTCCTGCAGC TATGGCCACC ACTGCTTCAA GGCAGTGATG TTTCTCTCAG 000160 000161 GCCTGCTGTC TGGAGCTCTG GTGATCTTCC TGCTCTTTCA CAAGGAGCAG GTGCTGGAGA TACAGCTGAG ATTGGGGGTG 000240 000241 AGCACGGGCA TCACACTGGG CATTGGACTC TTCTGCAGCC TGGTCACCAT GTTGATTTGC AGTGTTGGGC TCTTCCTGAT 000320 000321 TAGTCTCCTT CTAGGTCTGA ACCTGGATGC TGGGACTCTG CTGGGCACTG AGTCCATCTA ACAACCACTT TCACTGGGTG 000400 000401 CTGGCAGGGG GTGGTGGTGG GGCTGGAACT GCTGGGAGCC CTGCTTATGC TTCAGTGGCC ATGTCCATTC ATAGTTCTGG 000480 000481 GCACAGCCCT GCTGGGTGCT ACGGTGCTGG TGGCTTGTGC TGACTTCTTC CTGGAGGGTC TGGCACTGGG CAGTTGGCTG 000560 000561 GGTCAATGCT GGCAGGCACT TCCAGCCTTG CCTCCTTTCT GCTGGTATAG CTAGATTTTA TTGAACTCCT GGCCAGCCTT 000640 000641 GGGGGCTTCT AGGGCCCTGG CCCAGTGGAA GCTCATGGCT AAGGAACATG GAGGCCATGC TAATGTGACC TTGAGCTACC 000720 000721 AGCAAAGGGG TCTCCAACTC CTTTGGATCT ATCAACAAGA GACCAAGTAG CACCAGACCG CCTCTGGGGT GGGGCTTTGT 000800 000801 GAAAGTAGCT ATAGGTGTCA GCTCCCTGCC AACACCCAGA GCCCTGCTGA CAGTCTGGCT CCAAGTTATC TCCAGAGTCT 000880 000881 TTGAGAGCAC CAACTGGAAC CAGTCCCTGA GGCCACAGTC CCCCACACTC ATCTGGACCT GGGTTCTGAT TGTGGTTCCA 000960 000961 CTGTTCCCCT CACAACACCC TCT |
Predicted Small Protein
Name | NONHSAT121700_smProtein_446:613 |
Length | 56 |
Molecular weight | 5987.1043 |
Aromaticity | 0.163636363636 |
Instability index | 48.8145454545 |
Isoelectric point | 3.66571044922 |
Runs | 4 |
Runs residual | 0.0787878787879 |
Runs probability | 0.0582935877052 |
Amino acid sequence | MLQWPCPFIVLGTALLGATVLVACADFFLEGLALGSWLGQCWQALPALPPFCWYS |
Secondary structure | LLLLLLLLEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiii |