NONHSAT121707

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT121707

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1726 nt

Genomic location

chr7+:79083012..79089875

Exon number

3

Exons

79083012..79083560,79088163..79088315,79088852..79089875

Genome context

Sequence
000001 GCCGGGGGCC ACTCCTGCGT GGTGCGAGTG GGAACGCGCG CGCGCGCCTG GGTGTGTGTT GTTAGCTGAT ATCCATGGCA 000080
000081 GCTGCAGTGG CAGGgtgcgt gtgcgtgtgt gtgtgtgtgt gtgtgtgtAC TAGTTCTACT GTACTGGCAG ACGGGAGGAG 000160
000161 GCAGGGGAGG AGGGGCGCGC GCGCCGGGTG GGGAGCCACG GAGGGCTTCG CCGCTGCCTC CCTCCCTCCC TCCGCAGCTT 000240
000241 GACCCGGTAG TGAAGGCAGA GAGAGAGGCA GGCTGGGTCC GCCTGGCAGC CTACGGGAGG AGGCGGGAGC CGGGAAGGAG 000320
000321 GGGAGCCTAG GCCCGGCGTG GGGAGGCCGG CAGGAAGGGC CTCGAGCCCA GTGCGGACCT TTCTTCAGCC TCTGTGCGAC 000400
000401 CGAGCCGCGC GCCAGGCTCC TGTGCGAGGA GGACGCGCTG ACTCCCTCCG ACCTGGGCTC CGATGGAGCA GAAATAGCGG 000480
000481 GACCTGGACT TGTGGCGCGC CTGGTGCCAC ATCTCGGGCT CTGCGAGCGT CCTGGCGCGG GATCCTGCCT AATGTCTTAC 000560
000561 AATAACAGAA TGCAGGAGAG CACATATCAA TGAAGAAAAG ACAAAATGTA CTTATCCATG AAGCTGAGGT TAAGAAACCA 000640
000641 GTGTCTTCAA GAGCCAGGGA CAGCACTGGG TCTGTGCAGA GTTGAGAGAT GGTGATGACA TGTGGTTTCC AGCATTCCTC 000720
000721 ACCCAGTCCA GGGACACTGT GGGTGTGCCC AGCTTAAGTC CAgtaactgg aaatacaagc ccaagttctg gagagtttga 000800
000801 gctgcagaga tatatatggg aacactttga atcttgactc attggccata accagcagag tggaaaatac aagaagagaa 000880
000881 aaaaacattg aactgcgatt ttataacatc ctttactagg cagagagaag aggaaacacc aggaaagaaa actgTATTAC 000960
000961 GATGTGAAAA CTTAATGTTG AGAAATTCAG GCATCTTGGG GTTAGTGAGG AGAAGTTTTA GGGGCTTAGA TTCTTCTAAA 001040
001041 CACATGTACA GAAATGCATA TTTCATCTGA TATCAAATGG CATTTATAGT GCTAATCTTT ACCTCAAGAC TTCACATCTT 001120
001121 TTGGTGATTG CATCTTTTAG GTTTATAGCA GCTAAGTTTG CATGAAAACA CCAGGGCTGT TTCATTTCAG TCAAGAATTA 001200
001201 ATGTTCATTG ATTGTGCTTC TGCATTTCAT GTAACTATTG TAGAATTTGT TTTAGTTTTA TGAGGGAATA ATTGTTCCAA 001280
001281 CTTCTATATA ACTCAGGAAT TTACTCTCAA ACAACACTGT CAATTAGTTA CTTATCTCTC TGGAAATGAT CTGGGAACAT 001360
001361 GGAGAGGAAA GGGAGGAAGG GGCAAAATCT GACCACTTAA ATCTAAGCAT ATTAGATCAT TTTATGCTAG AAAGTCCTGA 001440
001441 ATGATGTGAC TTTCGTTCTT GTAAAACACC TCTTTCCATA GATTCATGGC CCAAACAGTA TATAAAGAGT GGGGAAGGAA 001520
001521 CTGCATTTGC AAATAGTTCA AATCATTGCT CCATCTTAAC TACGCAGTTC ACAAAGTGTG AAGAAATGTG ATCATCTCAA 001600
001601 AAAAGATAAT GGGGAAAAAA TATGTTTTGT TCTGTGACTT TAAAGTCTTG CAATATTTTA CATAAATGAT AATGGGTGCT 001680
001681 TTAATAAGAA CTCTTGATAC TTTTGTTATT GTATTCAATA TATGCA
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Predicted Small Protein

Name NONHSAT121707_smProtein_74:241
Length 56
Molecular weight 5344.1668
Aromaticity 0.0363636363636
Instability index 47.1581818182
Isoelectric point 8.70452880859
Runs 9
Runs residual 0.0121212121212
Runs probability 0.0408251388643
Amino acid sequence MAAAVAGCVCVCVCVCVCTSSTVLADGRRQGRRGARAGWGATEGFAAASLPPSAA
Secondary structure LHHHHLLLEEEEEEEEEELLLEEEELLLLLLLLLLLLLLLHHHHHHHLLLLLLLL
PRMN LLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo i??????????????????????????????????????????????????????