NONHSAT121822
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT121822 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1031 nt |
Genomic location |
chr7-:86827544..86848942 |
Exon number |
2 |
Exons |
86827544..86828373,86848742..86848942 |
Genome context |
|
Sequence |
000001 CGACCACTCG GGTTCGGCTA TGCGGGAGCC GTGAGGAGGA GGCTTGCAGT CGTGGACCTG AGACCTCGGG AGGTCATGCT 000080
000081 GTCTTGCTTT TAAGTGGCTT GGGGAAAGTG AAGAAACCCC AAAATGGAGG ACTTTGCTAC CAGGACCTAC GGCACCAGTG 000160 000161 GCCTGGACAA CAGACCTCTG TTTGGGGAGA CGTCCGCCAA GGATCGAATC ATCAATTTAG TTGTTGGCAG CTTAACATCC 000240 000241 TTATTGATTC TAGTAAGTAT CCTCATTTTG TGCCTCACCC AGGCTCTTAG CCAGTTTTGA AAACTTTATC AATTATGGTT 000320 000321 AACTTTCCAA AAAAAGCTAA ATAAGTGCTT TTAATTTTAT TACCACAAAA TTGCAGTTGC TAATTGGAGT AGCTAATTTA 000400 000401 ATTCTGCCCC ACCCCCAGGT TGAATATGTG AAATGGTACA AGTCAGACAA CTTCGTTTTA AGATAATTGA GTTTACCATG 000480 000481 TTTTGCCTAG TAAATTTGTA AAAATGTCAG TGGCTAGTAG CCACTTCCTT CTGTCATCTA CCATAATTCC CCATTTCTAT 000560 000561 TTTGTTCCTG AAGAACATAT CCATTACCCT TTGGTCAAGT TTTAAAAGAT TTGGTCACAG TGTATAGTAG TTGTACTGTA 000640 000641 TACATCCTGT ATACAGTATA CATCTGGGAG CTATTACAAT AAAATTTTTA AAAGCTGTAT TTTCCATAGT TTGACATTTT 000720 000721 TCTGGCACAT TAAATTTAAG AGAATTTTTT TCCATGGCTT CTTAATGAAA AGATTGCATA TAATGCTGCA TCTGTTAGAA 000800 000801 ACAGAACTAT ACAACATTAG AAGTCTTTCA GTGTGTTTCA TAATGTTATA GCAAAACCAG CTTTGATTAT ATTCATTTTG 000880 000881 CTAGAAATAT TTAAAATAAC AAAATGGCTA GAACTTTTAC CAGCAGAATC ATTAATCCTG GGAGTGAGGT TTAGTTAATG 000960 000961 AAGTTATTTT GGCATCAGCT AGTATTACTG ATGTTTTCTC TCCTTTCATA AGTAAGGGAA AGTTTAGAAA A |
Predicted Small Protein
Name | NONHSAT121822_smProtein_503:604 |
Length | 34 |
Molecular weight | 3874.4629 |
Aromaticity | 0.181818181818 |
Instability index | 89.3396969697 |
Isoelectric point | 6.36676025391 |
Runs | 7 |
Runs residual | 0.0279973649539 |
Runs probability | 0.0233931410402 |
Amino acid sequence | MSVASSHFLLSSTIIPHFYFVPEEHIHYPLVKF |
Secondary structure | LLLHHHHLLLLLLEELEEEELLLLLLLLLLLLL |
PRMN | - |
PiMo | - |