NONHSAT121903
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT121903 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2666 nt |
Genomic location |
chr7+:89964537..89973408 |
Exon number |
6 |
Exons |
89964537..89964885,89965808..89965898,89967480..89967621,89969690..89969838,89970829..89970913,89971559..89973408 |
Genome context |
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Sequence |
000001 aagttttgtt cttttgctct ttgcaaaagc tcttgctact gctcattctt tgggttcata ctgcctttat gagcagtaac 000080
000081 actgatcacg aaggtctgta gcttcactgc tgaagccagc aagaccacaa acccactggg aggaatgaac aactccagac 000160 000161 ctgctgcctt aggagttcta atgctcaccg tggaggtttg cagcttcact cctgaggcca gcaagaccac gaacccacca 000240 000241 gaaggaagaa actctgaaca catctgaaca tcagaaggaa caaactctga acacgctgcc tttaagaact gtaacactca 000320 000321 ccacgagggt ccaaggcttc attgttgaag aaagaaacat aattacgtgt ggaaaagcag gaactcaggt ggggtaagaa 000400 000401 accaatcgtg atgaatgagg gcttgaactc tcattgtctg agacgggatt tcaccgtgtt agccgggatg gtctcgatct 000480 000481 cctgacctcg tgatccaccc gcctcggcct cccaaagtgc tgggattaca ggcgtgagcc actgcgcgcg cgcccggccc 000560 000561 cttaccgttc ttggaatagt gaggaaatca agagatggag aaattggccc accaaccact ttggtggtaa aagaggagag 000640 000641 tttcctttgt gattggcccg cgctcctaaa tttgcccaag taaaatctac atgagtgttt cccacgactt ggaggtggat 000720 000721 tgcatatgag gCATTTAGGG CATACCCCAT AACTCCAATT GCCTCACTAG TAGACATTTC CCAGTCAAAT AAGATATGGC 000800 000801 CTGAGGAAAC GGCCCAacag tctcactctg tcacccagac tggagtgcat tggcatcatc atggcttact gcagcctcaa 000880 000881 cctcctgggc tcaggtgatc ttcccaccac agcctcacag gcagcttaga ctacaagtgt gtgccatcat gcccagctaa 000960 000961 tttgttgtgt tttttgtaga gacagggttt tgccatgtca ccaggctggt ctcaaactcc tggactcaag agaccaacct 001040 001041 gccttggcct cccaaagtgc tgggattaca gctgtgagcc actatgcctg gccTCTTATT TTTGTTTCTT ATTCATATTA 001120 001121 TCTAAGAATT TTAATTTACT GTCAGTGGTT ATTGCTTTAT GAAATCTCAG TAACAAGAAG CAAAGAAAAT GAGATCAGTA 001200 001201 AGTGAGAATC CTGAATACAT TACGAACTTT TCTGCTCATA AGTCCTCTTG TTTGAACAAA CAGGAAGCAT TATCATGAAA 001280 001281 GTCTCTTCTG ATAATTCCAC TGCCATTCTT ACATCTATCA ATGATTGAAA TAAAGTATAA AAAATGAGAC TAACCGATGA 001360 001361 CTAATAGGAT AGTAGAAGAC CCTTAAAATA GTTTTATTCC TCTAGTACAG GTGGTCTTAA ATGGGGGTCT TAAAAAAATG 001440 001441 ATTCTAATTC TCAAGATTTC TAGAAATGCT TCCTAAAAAG TAACCTTTAC ATTATATCCT TCAAATTAAA AGCAAAGTGC 001520 001521 CTTAACAGCG AAGTAAAATC ATGTTCCATA GGAATAAATT TCCTCCACTC ATTATGAATA CAGGTATCAG AAAGATTAAA 001600 001601 ATTTACTTCT TTCTGTCATT GACACAACTA CTCTGCTTAT TCTTGCTTAG TTATTTCAGT ACCCATGACA GTGTTCCAGC 001680 001681 ACATAGCTGA GTATGTGGGA CAAATTCAGA ACACAGAAAT TATTATATTA ATGCATGAAT AAATGAATGA ATAGTTGAAG 001760 001761 TGTAAGTTCC TAGGAAGAAA GGCAATGAGA TAAATCCACT TTTTTTCCCT CACATAGGCC TTGTTTGAAG ACAATAATTA 001840 001841 CATGGCCTGA GGCCCTCTCT TTGAGAATAC TTCATTTTTA CTCAAAGAGG TCTTACCTAG TATGTAAACC TCATTTGTTT 001920 001921 GATCCATTTA ACTTCATCAT TTGGGAGATA TAATGGTTCT CAGACTTGTA ATATTTTGAC GGCATGAAAC AAATAATATT 002000 002001 TGATTTGTTA CATCTGAAGG ATTATAAGGC TAATGAGTAA GAATAACTCG ATGCTCCACT TCAGGTGATT CGTATGCTAT 002080 002081 AGGAGTTAGC AATCTAGTTC TTGTCTTTCG TTTGAATAAA TTAACAAATA TTCCTAGAGT ATCTACTGAT TACAAGGCCT 002160 002161 GAGCCAGACG GACCTTGTTA GGGACTCTTG AACAAGCAGA ACTAAAAGCA TGATAGACAA AAGGTAGAAA TCTAATTAAA 002240 002241 AGCAGTTGAG ATGATGACAC AAGATCAATT GAAATAATCT GCAAAGCCCA GAATGAAGTT AGACACTTTT CATTTTAGTC 002320 002321 TGCTGACAAA ATTAAGCAAT ATAACATCAC AAAATATTAG ATTTGTTAAT TATATATTTG TCTATTTTAT GCTTAAGTGT 002400 002401 ATCTACATTA AATGTTAGat taaatgcaat gtggtgttag tattagaccc tggagtaaag tcataggtga aaaaccagtg 002480 002481 aaagcaaata gtctgtagtt tagttaatat tctagcaata ttaatttttt tagttttgaa aaatggttat aaaagatgtt 002560 002561 aacattcggg caaactggat aaagattaca tggaatctct tttggctatt tttgtaactt ctgtaaatta aaaagtactt 002640 002641 caaaataaaa ttatttaaaa TTGTAA |
Predicted Small Protein
Name | NONHSAT121903_smProtein_1664:1741 |
Length | 26 |
Molecular weight | 2958.4097 |
Aromaticity | 0.08 |
Instability index | 65.256 |
Isoelectric point | 4.91741943359 |
Runs | 5 |
Runs residual | 0.00830188679245 |
Runs probability | 0.044850733086 |
Amino acid sequence | MTVFQHIAEYVGQIQNTEIIILMHE |
Secondary structure | LLHHHHHHHHHHHHLLLEEEEEEEL |
PRMN | - |
PiMo | - |