NONHSAT121949
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT121949 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1653 nt |
Genomic location |
chr7+:91510142..91516400 |
Exon number |
2 |
Exons |
91510142..91510178,91514785..91516400 |
Genome context |
|
Sequence |
000001 ACGCTAGGGG CCTGGCAGGG GGCAGCAAGA GACCGCGATG GCCTATATAC ATATACCCAT AGAGTATATT GAATATTTTT 000080
000081 ATTcaaccct atgaggcagg tatcatagtt ttgcagatga aactgaggct cagatgaatt aagtgactGT Gtgtcttcgt 000160 000161 ccatttttgt gttgctataa aggattacct gaagctgagt aatttataaa gaaaagaagt tcaattggct cacagttctg 000240 000241 caggctgtac aggaagcatg gcactgacat cttctcagct tctggtgagg gcctcaggaa gtttacaatc atggtggaag 000320 000321 gcaaaggggg agcaagcgtc tcatgtggca agagggaaca aacaggagac aggaggtgcc acacactttt aaacaacagg 000400 000401 atctcacaag agcttactct tacaaggaca gcaccaagaa tatgaggaat ctgcccgcat gacccaaaca cttccctcca 000480 000481 ggccccacct ccaacactgg ggattacatc tcaacactgg atttggaggg gacatccaaa ctatatcaag gctgtacaag 000560 000561 aagcttggtg ccagcatttg cttctacgca gagcctcagg ctgcttctac tcacagtaaa aggcaaaagg gcatgcaaag 000640 000641 atcatgtggc aagagaagaa gtgagggatg ggggatgcca tgctcttttt aacaaccagc tctcatggga accaagaggg 000720 000721 acaactcact cattatagca ccaagcctgt atccctccca ttatgcccta cctccaacat cgaggatcaa atttcaacat 000800 000801 gaggtttgga ggctcaaata tccaaacaat ggcaTTATGT caggatcata aagctaatgt ttgtgaaacc aggatctgaa 000880 000881 cccaagctat tgcttctaga acctgtactc ttaagccctt gcttatactg CATTTGAAAT TATGCTTCAT TGTATAAAAA 000960 000961 GTCCTTTTCA CCTCAAGCTT ATAGAGAAGT CACCTTGTTC ttaaaaagtc ctttacactt caagttcata aagctcaggc 001040 001041 acatatattt tcttccagta cgttcattat tatttttctt ggttttcctt taaatctttg aatcatctgg attttatttt 001120 001121 ggaatgagaa atgaagtaga aatttatttt tgtttctttt cagaatggct ggtcaattgt cctaacatca tttaatgaat 001200 001201 agtatttatt tcccctttgc tttgaaatac tactttatca taTACTAAAT TATAAAGTAA TCTTTTATTA TCATTTTTGA 001280 001281 ATGACTGCAT TCCAGTTGTG GAAGATATTA CTCAAAGTCT GTTGTGATTA TCTAACTTAA GTGTTGATAT GAAGAAAGGA 001360 001361 AAGTAGGTTT CAGCCTGATT TAAGAATTTT CCTcctctcc ctctccctct ccctctccct ctccctcccc ctccccctgc 001440 001441 ccctccctgt ctccctctct ctctccctct ctttctacgt ctccctctct tgccgagcct ggactgtact gccatgatct 001520 001521 cggctcactg caacctctct gcctcaggct cccatgattc tcctgcctcg gcctgctgag tgcctgggat tccaggcacg 001600 001601 caccaccact tctgactgat ttttgtattt ttggtggaga cggggtttca ctg |
Predicted Small Protein
Name | NONHSAT121949_smProtein_458:691 |
Length | 78 |
Molecular weight | 8650.8361 |
Aromaticity | 0.0909090909091 |
Instability index | 71.3949350649 |
Isoelectric point | 10.1538696289 |
Runs | 11 |
Runs residual | 0.00677583286279 |
Runs probability | 0.0361805655924 |
Amino acid sequence | MTQTLPSRPHLQHWGLHLNTGFGGDIQTISRLYKKLGASICFYAEPQAASTHSKRQKGMQ RSCGKRRSEGWGMPCSF |
Secondary structure | LLLLLLLLLLLLLLLLEELLLLLLHHHHHHHHHHHLLLEEEEELLLLLLLLLLHHHHLHH HLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |