NONHSAT122125
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT122125 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1989 nt |
Genomic location |
chr7-:96594839..96643377 |
Exon number |
3 |
Exons |
96594839..96598430,96607659..96608903,96643237..96643377 |
Genome context |
|
Sequence |
000001 ATTTCACACC TGGATGTGCT CACTCAACCA AGAATATAGA GAAAGAGCTT CTGCCCTGAG ACTCAGAAAA ATATTCTCCT 000080
000081 GTGCTTTGGT TCAGTATAGA TTTCTAAACC CTGATCATTG CTTAAGAGAT ATTCACTGAG GACAGAGTCT TGCTCTATTG 000160 000161 CCCAGGCTGC AACTGGTGTG ATCTCGGCTC ACTACAACCT CTGCCTCCTG GGTTCAAGCG ATTCTCCTGC CTCAAGCTCC 000240 000241 CAAGTAGCTG GGATTACAAG CATGCACCAC CATGCCTGGC TAATTTTTGT ATTTTTAGTG GAGACGGGGT TTCGCCACAT 000320 000321 TGGCCAGGGT GGTCTTGAAC TCCTGACCTC AAGTGATCCA CCTGCCTTGG CCTCCCAAAG TGCTGGGATT ATAAGCATGA 000400 000401 GCCACTGCAC CCAGCCTTAT ACTGAACTTT CAATGGGTTC AATTCCACTA GGAGCATAAA GGCCACTGCA TATGAGTTGT 000480 000481 GGAAAGAAGA GATTAGAAGA AGGAAGAACT TGAGATGAGT TCCTCCCTTC AACATTCTGT CTCCTCCTAC CTAGCATCTT 000560 000561 CTTTCTTTTA GTCTTTCTAG AATGTCCATC TGTTTTTGGC CATTGCGGAG AGAGAAGCTG AGCTTTAAAG GAGTAGGAGC 000640 000641 TTCAAAGGCG TAGGAGCTTC AAAATTCTTG TTTCTTCATG TTTGATCACC CTTCTAAACC TGTCTTCTGT TCCTTCTGCT 000720 000721 ATTCTTTTTT CTTAGAGCAT AGGAAAGGGG AGCTTTTAAA TTAATACTTA AAGCATGGAA AAAAAGAACT TGAGAAGAAA 000800 000801 GTAAAACAAG GGAGATGAGG CTAGTAAAGT AAGGAAAATG AAGAGGAAGA GGAGGAAGGG TTAGCTTCTA AATTCCAAGT 000880 000881 CAAATTGATA TGGAACAGGC AAGCCGCTTG TCTTACTTAA ACTTCAGAAA AGGATCTGCT GAAACTTGAT AGAAATGGAA 000960 000961 AGGGAAATCC TTGGGGTGGG GAACCTCCAA ACATTAGTAA TGATATTGAA CAACTCAAAG TATTGAGGAA ATCTGCAGGC 001040 001041 TACATGCCTG AAGATTACCC ATGCAGATAG ACCAAAAGGA TTAGAATTAT CTGTTGATAT TAGTAATATT TATTGACATC 001120 001121 TAGCTAGTAT TGGTAATTTT AAGTTTTAGA TTAATTTCTT TGGTAATAGC TATGATATAT TTTATAGACA AGAATTATAT 001200 001201 CTATAGGCTT GCTATCATAG GCTCTTTTAA TCAGCATTAA TTTAGTCTAC TGATTTTTAG CACATTTGAA TCATTCACTT 001280 001281 ATGCTAGGTA ACTCATTGCA AAATAAAAAG ATGATTCCTG TATGTATGGC AGCTATACAT TAAGGAGGAG TCTACCAGAA 001360 001361 TATGAAAAAG TCAGCTGACC TAAATATTGC TGAGACAAAG GAAAACCCAC TCCCTTGGAG GAGCATGACC TTTTCCTGTA 001440 001441 ATTCTTCCCA CTGCTGTTGT TGAGCTCCTT GGATCCTGGC TCCTGGACAC CATCATCAAG AAGACTTTAT GGATGGGCTG 001520 001521 TCCACCCACT GAGAGAAGAG GAGCATCAGC TACAGTTTCT CTCTAGATTG CCTTCTTCAT TTTGAGTAAT GACTGTCAGC 001600 001601 AGGGTCAGAT TAAACACAAA ACAACTGGAC AATTGCTTGG AGGACTAAAC TATAAGGGCA CTAACATGTC AATAGTAGGC 001680 001681 TAACACATCC ATGGAAAATA TATTTACCAG CTCTTCTCTC AGGGAGGATT CTGTGTGGGG TTGGAAGTAA TGATTTGTTA 001760 001761 AATTCCTTAG GGGTAGAAAG TAGGGCATAA TCAGAATATA GAGGAATATG CTGTTTGACT TCAGGGTTTC TGTTTTTCTT 001840 001841 ACTAGGATAT ATAAAACAGG GACTCTAGCT AGATTGTTTA TGACCACAGA GGGTAGGCTG AGTGCTCCCA TGATCTTCCT 001920 001921 GCTTGGTTCT TGCCCATACA GAGGTCAGCC TTTCCTCTAA TAAAGATTGA ACAAGTAGTG GTCTGAGGG |
Predicted Small Protein
Name | NONHSAT122125_smProtein_1361:1462 |
Length | 34 |
Molecular weight | 3733.281 |
Aromaticity | 0.0606060606061 |
Instability index | 56.4272727273 |
Isoelectric point | 7.67608642578 |
Runs | 7 |
Runs residual | 0.0279973649539 |
Runs probability | 0.0369066545538 |
Amino acid sequence | MKKSADLNIAETKENPLPWRSMTFSCNSSHCCC |
Secondary structure | LLLLLLLLHHHLLLLLLLLLLEEEELLLLLEEL |
PRMN | - |
PiMo | - |