NONHSAT122157
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT122157 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1012 nt |
Genomic location |
chr7-:97576299..97577310 |
Exon number |
1 |
Exons |
97576299..97577310 |
Genome context |
|
Sequence |
000001 CATTAAGGAC TGGTTTTTAT CTTTTATTTT TCCAATCCTC TTTCCTTCTC AAGGTGTCCA AGACACACAG AGCCACAGAA 000080
000081 TCTCACAGAT GTCTGAGAAT TCCTCCTCCT GGGACTCTCA GAGGATCCAG AACTGCAGCC GGTCCTCGCT TTGCTCTCCC 000160 000161 TGTCCCTGTC CATGTATCTG GTCATGGTGC TGAGGAACCT GCTCAGCATC CTGGCTGTCA GCTCTGTCTC TCCCCTCCAC 000240 000241 ACCCCCACCT GTGCTGGGCT GACATCGGTT TCACCTTGGC CACGGTTCCC AAGATGATTG TGGACATGCA GTCGCATAGC 000320 000321 AGAGTCATCT CTCATGCGGG CTGTCTGACG CAGATGTCTT TCTTCATCCT TTTTGCATGT ATAGAAGGCA TGCTCCTGAC 000400 000401 TGTGATGGCC TATGACTGCT TTGTAGCCAT CTGTCGCCCT CTGCACTACC CAGTCATCGT GAATCCTCAC CTCTGTGTCT 000480 000481 TCTTCGTTTT GGTGTCCTTT TTCCTTAGCC TGTTGGATTC CCAGCTGCAC AGTTGAATTG TGTTACAATT CACCATCATC 000560 000561 AAGAATGTGG AAATCTCTCA TTTTTTCTGT GACCCCTCTC AACTTCTCAA ACTTGCCTGT TCTGACAGCG TCATCAATAG 000640 000641 CATATTCATA TATTTCGATA GTACTATGTT TGGTTTTCTT CCCATTTCAG GGATCCTATG GTCTTACTAT AAAATCATCC 000720 000721 CCTCCATTCT AAGGATTTCA TCATCATATG GGAAGTATAA AGCCTTCTCC ACATGTGCCT CTCACCTAGC AGTTGTTTGC 000800 000801 TGATTTTATG TAACAGGCAT TGGCATGTAC CTGACTTCAG CTGTGTCACC ACCCCCCAGC AATGGTGTAG TGGCGTCAGT 000880 000881 GATGTATGCT GCGGTCACTC CCATGCTGAA CCCTTTCATC TACAGCCTGA GAAACAGGGA CATACAAAGT GCCCTGCGGA 000960 000961 GGGTGCTCAG CAGAACAGTC GAATTTCATG ATCTGTTCCA TCCTTTTTCT TG |
Predicted Small Protein
Name | NONHSAT122157_smProtein_293:535 |
Length | 81 |
Molecular weight | 9068.8251 |
Aromaticity | 0.125 |
Instability index | 53.04625 |
Isoelectric point | 6.12823486328 |
Runs | 12 |
Runs residual | 0.0111842105263 |
Runs probability | 0.0321645174586 |
Amino acid sequence | MIVDMQSHSRVISHAGCLTQMSFFILFACIEGMLLTVMAYDCFVAICRPLHYPVIVNPHL CVFFVLVSFFLSLLDSQLHS |
Secondary structure | LEEELLLLHHHHLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLEEELLLE EEEEEEHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLHHHHHHHHHHH HHHHHHHHHLLLLLLLLLLL |
PiMo | oooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTiiiiiiiTTTTTTTTTTT TTTTTTTTTooooooooooo |