NONHSAT122224
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT122224 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2172 nt |
Genomic location |
chr7+:98913865..98916438 |
Exon number |
2 |
Exons |
98913865..98914431,98914834..98916438 |
Genome context |
|
Sequence |
000001 cacgcctata atcctagcta ctcagaaggc ttgaatcgct tgaacccagg aggcggaggt tgtagtgagc cgagattgca 000080
000081 ccactgcact ccagcctggg tgacggagca agactttgtt tcaaaaaaaa aaaaaGACTC CCAATTTCAC AAAAGCCAAA 000160 000161 AACAAAAAAA ATGGCTGAGG ACCTTgtctc tagtcccagc tacttgggat acttgggagg ctgaggcagg gtcacttggg 000240 000241 cccaggagtt caaggctgtg gtagctatga ctgcacctgt gaatagccac tgcactctac cctgagcaac acagcaagac 000320 000321 cccatctcaa aaaaaaaaaa aaagaCTGAG Gtgaagaact gttccagatt agactaaaga aagataagaa ctaagtgcaa 000400 000401 caactgatct cagattggct ccaggattgc ggggaaaaaa aaaaaaaagc tagaaaggac attattgacc aggcacagtg 000480 000481 gcttacacct gtgatcccag cactttgggt gcctgatgca ggcagatcac ttgagtccag gagtttgaga ccagcctggg 000560 000561 caacatggaa gtatgaggag tgaagagtct catgtctgtg acttacaaaa tgactcaaca aataattata tcactattac 000640 000641 tattacacag atacacatat tttatatata tatatatatg agagagagag aaagcaaatg tgacaaaatg ttcacaagtg 000720 000721 gtaaatttaa ggaaacaggt atattgatat tcattattct cacatatttt gcaacttttc tgtaggtttg aaagttttta 000800 000801 aggaaaaaaa GAAATACATA GGAGGTGGAG GTGCTATGAC TTGGTAACTA ACTTCCTGGG GGCCATTAAT CAATCTGTGG 000880 000881 TGGATGATGA TACCTTGGTC TGAGAGGTAg aggagagcag aatctgaggt ggggagcaga ggcaaacatc aggtttgaca 000960 000961 tcaattgaac tgaggtggga ggtgatgaga caccaggtgg agactgtcat gagggagcag tatgaattaa caggggtcag 001040 001041 gaacaaactg agatgcagat ctgcaggttg gcagtctatg ggtggtggct gaagccaaga gcttgtgaga tcacctagag 001120 001121 ggcaggtgtg gatggGCCCA TATTCTTGGG CTCACTTGCA CTTAAGATCT GGGTGCAGAA GTAAGAATCA AGCAAGAATG 001200 001201 GTTACGCTCA TGAGCAAACC AGCTATTTCA TTCAGGGTTC CTATAAAAAT AACCATTAGA CTTGCGATTT TCTACCACTT 001280 001281 TAAATCTCCT CCTAGAGACA CTCTTGTATT GGTTAACTTC TCTCCAGGTG GGGGATTACG AGGCTTTTGT CAACATCTTC 001360 001361 CTTGGGAGCG TGATATGGTA AGAAGCCTAC AAATACATTT GTGATATAAG CATGCAAAAC AGAGGTACAC TATATGCTAC 001440 001441 AATTAGAACT ACGATCCTCC CAGGTtaatt cattcctgaa aacaattctc agatcaaata agcccatatg aagttatttt 001520 001521 aaatgagaaa ataggaatgt attcctagcc tgtgcagaaa ctccagtttc tccaaatatc actaaaaccc tctcaaacat 001600 001601 ctataaaaca atcctccaaa catttctgca taatataaac atttaaacat gaattatcta attatttaac acttaatgaa 001680 001681 ctccatggtg attacgtttg caatagtaca caatgatatg cactctattg aatgagaatt agatatcctc cccaacctgc 001760 001761 aactaacatg tacagtaaag caaacaacaa cataatagtg agttaaagat aGATAATTAA ATGCAACAAG ATTTAGCAAA 001840 001841 CTGAAATGGA CAAATGGGAT TTTTTTTTTA ATGGCTACTT GCCGAATGAt tctgataatg gagcactggg gcaacagaca 001920 001921 accctcccat tagtgataat tagaaaagtg ggcaaaatat acaaaatatc tactcaaaga taagagagca ctaatgaggt 002000 002001 agtaaatacc taccaggtca atgtccaaga gaacagagta tgtaagagag tgagcccatc agcaggactg ttttacccca 002080 002081 agggctactt ggtgattcca gaacaggtgg ctgagagcct aagcagtact tgttttgttt ttttttgttt ttttttgaga 002160 002161 aggagtctca ct |
Predicted Small Protein
Name | NONHSAT122224_smProtein_572:784 |
Length | 71 |
Molecular weight | 8387.6144 |
Aromaticity | 0.157142857143 |
Instability index | 60.4772857143 |
Isoelectric point | 6.03302001953 |
Runs | 10 |
Runs residual | 0.0019801980198 |
Runs probability | 0.035841724077 |
Amino acid sequence | MRSEESHVCDLQNDSTNNYITITITQIHIFYIYIYMRERESKCDKMFTSGKFKETGILIF IILTYFATFL |