NONHSAT122248
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT122248 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
528 nt |
Genomic location |
chr7-:99084142..99096421 |
Exon number |
2 |
Exons |
99084142..99084586,99096339..99096421 |
Genome context |
|
Sequence |
000001 GGAGTGGGAG CGCCTGGACC CAGCACGGAG GGACTTCTGC AGAGAGAGTG CGCAGAAGGA TTCCGGGAGC ACAGTTCCGC 000080
000081 CGAGTGACAC TGTTTATGGA CCGTAAGAGC TGACCGCTGT CTGAAGGCTT GCCCACAGAC CTTACACTCA AAAGGATTCT 000160 000161 CTAAAAAGTG AATTCTTTGA TGTTGATCAA ACCATGCCTT ACGCCTAATG ACTTTTCCAC ATTCACTGCA TTCATAAGAC 000240 000241 TTTGCTCTTG TGAGAATTCG CTCATGCCCC AAAAGCAAAG ATCTTTGATT GAAGGGTTTG CCATCCTCAT CATATCTGCC 000320 000321 CTGCTTCCAC CTTGTTTGCG CATTCTGATC TTGAATAAGG TTAAGGTTTT GAAGGAAGCC CCTGCTGTAT TCATCACCAC 000400 000401 TAGTAGGGAA AGTAAGCCTG CAACTGTCCA CAAATTCTTT ACACTTATGT AACTTTTCTG AAAGTTTCTC AGCTGATTCC 000480 000481 TGCATTACCA CTGATATCTT ATATGACTCT AAATCTTCAG AAAATTTC |
Predicted Small Protein
Name | NONHSAT122248_smProtein_179:451 |
Length | 91 |
Molecular weight | 10110.174 |
Aromaticity | 0.0777777777778 |
Instability index | 59.0955555556 |
Isoelectric point | 9.55743408203 |
Runs | 13 |
Runs residual | 0.00458553791887 |
Runs probability | 0.0326525620643 |
Amino acid sequence | MLIKPCLTPNDFSTFTAFIRLCSCENSLMPQKQRSLIEGFAILIISALLPPCLRILILNK VKVLKEAPAVFITTSRESKPATVHKFFTLM |
Secondary structure | LLLLLLLLLLLLHHHHHHHHHHLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHLLLLL LHHHHLLLLEEEELLLLLLLLHHHHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHL LLLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTi iiiiiiiiiiiiiiiiiiiiiiiiiiiiii |