NONHSAT122460
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT122460 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2350 nt |
Genomic location |
chr7+:100942829..100954290 |
Exon number |
5 |
Exons |
100942829..100943147,100945588..100946309,100947291..100947843,100951600..100951829,100953765..100954290 |
Genome context |
|
Sequence |
000001 TCCCGGGAGT GAAGGGGATG GGGCCGACCC GGACCCTCCA GGGAACGCCC TTGAGTAACT CCCGCACTTG GGACCCCGTT 000080
000081 TCCACCCAGG ACCACAGGCT CAAGATGGCC TGGTAGATGC AGCCGGCACG CGCCTCTCCT CCGACGGGAA CAGAAGGAGC 000160 000161 CGGTAGGTTT TCACACTTGC AGCAGATCCG CTAAGAGAAC GAGGGATTCA GCCGAGAAGC CACTGGGAGC CCGAGGAGTG 000240 000241 GAGCAGAGGC ACCCAGGCAG CCTGCGCGGA GAAATCGGAT CGGCTGGGAC GGCCTGCAGC CCCCGCGCGC GGGGAAAGGT 000320 000321 TAAAATTAAA AGAAAAAAGC ATCCAAAAAT GCATACATCA ACGTAAAGGA TTTTTTTTTT TTTGGTGAGA TGGAGTCTCG 000400 000401 CTCTTGTCGC CCAGGCAGGA GTGCAGTGGC GCGATCTTGG CTCACTACAA CATCCGCCTC CCGGGTTCAA GCGATTCTCG 000480 000481 TTACTCAGCC TCCCAAGTAG CTGGGATTAC AGGCGCCCGC GACCACGCCC GGCTGATATT TTTATTTTTA GTAGAGACGG 000560 000561 GGTTTCCCCA TGTTGGCCAG GCTGGTCTCG AACTCCCTAC CTCAGGTGAT CCACCCGCCT CGGCCTCCCA GAGTGCTGGA 000640 000641 ATTACAGGCG TGAGCCACCG TGCCCGGCCA AATAGTCTAT TTATATTAGC AAACACACCT GTGTGCACAC GGAGCTTGCG 000720 000721 GACCAGTCTG GAAGGGGAGG GCGGGGCCGA CCCGGACCCT CCAGGGAACG CCCTTGAGTA ACTCGCGCAC TTGGGACCCA 000800 000801 TTCCCACCTA GGACCATAGG CTCAAGATGG CCTGGTGGAT GCCGCCGGCA CGCGCCTCTC CTCTGGCGGG AACCGAAGGC 000880 000881 GCCGGTAGGT TTTCACACTT GCAGCCGATC GGCTAAGAGA ACGCGGGATT CAGCCGAGAA GCCACTGGGA GCCCGAGGAG 000960 000961 CGGAGCAGAG GCACCCAGGC AGCCTGCGCG GAGAAATCGG ATCGGCTAGG ACGGCCTGCA GCCCCTGCGC GCGGGGAAAG 001040 001041 GGAAGAAGTC CTCCCCTACA AAGCGAGTTC ACAAACTTGG AAGAAGCCAC TTTCACAGGA TGCACAGATC TCAACGGAAG 001120 001121 GACACAGAAA ACATGAAAAA GCAAGGAAAT GGGGCGCCTC CAACGGAACC CAGTAATTCT CCAGCAGCAG ATCCCCATCC 001200 001201 AAAAGAAACA GAAGACATTT TGGAGAGAGA ATTGAATATA CATATTATAC AGTTGTGGGC ATAATACAAG CATCATTTGG 001280 001281 AAAAGAACAG AGAAAAAAGA TGGAAGGAGT TACCGTACTG CAGGAAAAAA TTATCAACTC CAGTGATATT ATTAAATACA 001360 001361 ACCTAACGAC ACTTCTGAAG CTGAAGAAAT CACTGGATGA AATACAAAGT AAACTCAAAA GCTTCAGTGA TAGACTAGAA 001440 001441 CAAGAAGAAG AAAGACTCTC AAAACTTGAA ATCTGAAGCA TGTTTCTTAA AGATTTAAAG GGTTATTATA CTCTGGCCAT 001520 001521 TAATGTGAAC GAAATCTGCT GGGTTAATTC TTATACTGGG GTCTTGGATA ATCATTAAAG TGAAATGAGA ATAAGACTAC 001600 001601 AGGCTCAAGA TGGCCTGGTA GATGCAGCCG GCACGCACCT CTCCTCTGAC GGGAACCGAA GGAGCCGGTA GGTTTTCACA 001680 001681 CTTGCAGCAG ATCCGCTAAG AGAACGCGGG ATTCAGCCGA GAAGCCACGG GGAGCCCGAG GAGCGGAGCA GAGGCACCCA 001760 001761 GGCAGCCTGC GCGGAGAAAT TGGATCGGCG GGGACGGCCT GCAGCTCCCG CGCGCGGGGA AAGGGAAGAA GTCCTCCCCT 001840 001841 ACAAAGCAAA TTCACAAACT TGGAAGAAGC AATTTACACA GGATGTGCAG ATCTCAATGG AAGGACACGG GAAACGTGAA 001920 001921 AAAGCAAGGA AGTGGGACGC CTCCAAAGGA ACCCAGTAAT TCTCCAGCAA CAGATCCCCA TCCAAAAGAA ATTCAAGAAA 002000 002001 TGTCATATAG AGAATTGTGG AAACTGATTT TAACCAAGAT TAGAGGGATT CAAGAGACTT CTGAAAAAGA AAGTAAGGAA 002080 002081 ATGTCAACAG CAATTCTGGA TATGGTTGAG GTATTTACCA ACCAGATACA GAGTTTTCCA GAGCACATGG CAAATGTGGA 002160 002161 ACTGAAGAAA TCACTGGATG AAATACAAAG TATACTCGAA AGCTTCAATG ATAGACTAGA TCAAGCAGAA AAAAAACTCT 002240 002241 CAAAACTTAA AATCTGAAGG CTTTTACTCA ATTCAAATAT TTAATGGGTT GTACTCTGGC CATTCAGGTG AACAAAATCT 002320 002321 GCTGGGTTAA TTTTTTTTTT TTTTTTTTTT |
Predicted Small Protein
Name | NONHSAT122460_smProtein_389:499 |
Length | 37 |
Molecular weight | 3929.491 |
Aromaticity | 0.0277777777778 |
Instability index | 91.8194444444 |
Isoelectric point | 11.8297729492 |
Runs | 8 |
Runs residual | 0.0417637917638 |
Runs probability | 0.0392156862745 |
Amino acid sequence | MESRSCRPGRSAVARSWLTTTSASRVQAILVTQPPK |
Secondary structure | LLLLLLLLLLLEEELLEEELLLHHHEEEEEEELLLL |
PRMN | - |
PiMo | - |