NONHSAT122803
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT122803 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
867 nt |
Genomic location |
chr7-:112593368..112635698 |
Exon number |
4 |
Exons |
112593368..112593811,112594658..112594823,112596577..112596757,112635623..112635698 |
Genome context |
|
Sequence |
000001 tgaggagata agtgacataa actggcatgt tctgaaagaa tcactctgga tgctgtgtgg agaaaacact gaaaagGGGG 000080
000081 AGAATAATTG ACTCCATtca agtgttcgct cctgtttcaa tcaactatgg ctgaagagtg aggagacatt tggaataaat 000160 000161 atggcttctg ggggcccatt cCTATGGATC AGCAGCTGGC TTCTGGAGGC CCATTCCTGT GAATCGTCGA TCTCATAGAA 000240 000241 GATAATATTG TTAGAAGGCT TACCTCATTG ATGCTGAACA TCCTAAAAAG CTTCTGCTGC TTTGAGTCAC TGAAAAAGAC 000320 000321 CAAGAAACAT Gaatttaaaa aaaaatttca aatgttataa aataaataat atGAACTCAT TATACCTACA ATGAATAATT 000400 000401 TAAATTCTTC TTTGGTAGTC CAGCATAGGT TTAGaaacta tgaaaaccct agaagaaaac ctaggcaatg ccattcagga 000480 000481 cataggcacg gacaaagatt tcatgacgaa gacgccaaaa acaactgcaa caaaagcaaa aattgacaga tgggatctca 000560 000561 ttaaactaaa gagcttccat acagcaaaag aagctaccat gagagtgaac agacaaccta tagaaaggga gaaaaatttt 000640 000641 gcaatctgtt catctgacaa aggtctaata tccagcatct acaaggaact taaataaatt tacaagaaaa aaacaaaccc 000720 000721 attagaaaat gggcaaagga catgaaaaga tacttctcaa aagacataca tgtggccaac aatcatacaa aaaaaacctc 000800 000801 aacatcactg atgattagaa aaatgctaat caaaaccaca acgagatacc atctcatacc tgtcaga |
Predicted Small Protein
Name | NONHSAT122803_smProtein_728:817 |
Length | 30 |
Molecular weight | 3356.8326 |
Aromaticity | 0.0344827586207 |
Instability index | 56.8137931034 |
Isoelectric point | 9.43011474609 |
Runs | 6 |
Runs residual | 0.0073275862069 |
Runs probability | 0.0429988812341 |
Amino acid sequence | MGKGHEKILLKRHTCGQQSYKKNLNITDD |
Secondary structure | LLLLHHHEEELLLLLLLLLHHHHLLLLLL |
PRMN | - |
PiMo | - |